Mechanism of Heterochromatin Assembly and epigenetic inheritance

异染色质组装和表观遗传机制

基本信息

批准号：
10619175
负责人：
Songtao Jia
金额：
$ 41.21万
依托单位：
COLUMBIA UNIV NEW YORK MORNINGSIDE
依托单位国家：
美国
项目类别：
财政年份：
2018
资助国家：
美国
起止时间：
2018-08-07 至 2028-07-31
项目状态：
未结题

项目摘要

Project Summary Covalent modifications of histones, such as acetylation, methylation, phosphorylation, and ubiquitylation, are essential for regulating chromatin structure and function and defective histone modifications have causal roles in numerous developmental disorders and diseases. Our long-term goal is to use fission yeast heterochromatin assembly as an experimental model to study how diverse histone modification activities are coordinated to initiate different gene expression states and how these states are epigenetically inherited. Heterochromatin preferentially assembles at repetitive DNA elements, and it is essential for regulating gene expression and maintaining genome integrity. The formation of heterochromatin is critically dependent on the methylation of H3 lysine 9 (H3K9me). Interestingly, the activities of H3K9 methyltransferases are stimulated by the ubiquitylation of H3 lysine 14 (H3K14ub), although the mechanism is poorly understood. We will examine how H3K14ub stimulates H3K9 methyltransferases and how H3K14ub is regulated in vivo to aid heterochromatin assembly. Heterochromatin is also a great model to study chromatin-based mechanisms of epigenetic inheritance. An important unresolved question is how parental histones carrying modifications are deposited onto newly synthesized DNA during the S phase of the cell cycle to direct the duplication of these modifications on daughter chromatids. We developed eSPAN (enrichment of Sequencing Protein-Associated Nascent DNA) in fission yeast, which allows us to measure the segregation of parental histones on daughter DNA strands. We will integrate this new genomic tool and traditional genetic approaches to examine mechanisms that regulate the segregation of parental histones and how they contribute to epigenetic inheritance. Together, these studies will address fundamental questions about how histone modifications are regulated and inherited, and how their dysregulation contributes to human diseases.

项目概要组蛋白的共价修饰，例如乙酰化、甲基化、磷酸化和泛素化，对于调节染色质结构和功能至关重要，有缺陷的组蛋白修饰具有因果作用许多发育障碍和疾病。我们的长期目标是使用裂殖酵母异染色质组装作为实验模型来研究不同的组蛋白修饰活性如何协调启动不同的基因表达状态以及这些状态如何通过表观遗传遗传。异染色质优先在重复的 DNA 元件处组装，对于调节基因表达和保持基因组完整性。异染色质的形成关键依赖于 H3 的甲基化赖氨酸 9 (H3K9me)。有趣的是，H3K9 甲基转移酶的活性受到泛素化的刺激 H3 赖氨酸 14 (H3K14ub)，但其机制尚不清楚。我们将研究 H3K14ub 如何刺激 H3K9 甲基转移酶以及 H3K14ub 如何在体内调节以帮助异染色质组装。异染色质也是研究基于染色质的表观遗传机制的一个很好的模型。一个重要的未解决问题是携带修饰的亲本组蛋白如何沉积到新的在细胞周期的 S 期合成 DNA，以指导这些修饰的重复女儿染色单体。我们开发了 eSPAN（测序蛋白相关新生 DNA 富集）裂殖酵母，它使我们能够测量亲代组蛋白在子代 DNA 链上的分离。我们将整合这种新的基因组工具和传统的遗传方法来检查调节机制亲代组蛋白的分离以及它们如何促进表观遗传。这些研究共同将解决有关组蛋白修饰如何调节和遗传的基本问题，以及它们如何失调会导致人类疾病。