Research Informatics (RI)

研究信息学（RI）

• 批准号: 9918313
• 负责人: CORNELIA M ULRICH
• 金额: $ 0.38万
• 依托单位: UNIVERSITY OF UTAH
• 依托单位国家: 美国
• 资助国家: 美国
• 起止时间: 至
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/9918313
• 关键词: Abbreviations; American; Architecture; Area; Authorization documentation; Basic Science; Bioinformatics; Biological; Budgets; Cancer Center; Cancer Center Support Grant; Cancer Information Service; Cancer Patient; Cancer-Predisposing Gene; Caring; Certification; Chemicals; Clinical; Clinical Research; Clinical Trials; Computer software; Computers; Consultations; Cost Savings; Custom; Data; Data Security; Data Set; Databases; Defect; Development; Drug Screening; Education; Environmental Impact; Epigenetic Process; Equipment; Evaluation; Family; Funding; Generations; Genetic; Genetic Counseling; Genomics; Genotype; Goals; Grant; Health Insurance Portability and Accountability Act; High-Throughput Nucleotide Sequencing; Individual; Informatics; Information Systems; Infrastructure; Institutes; Institutional Review Boards; Intention; Internet; Investigation; Investments; Knowledge; Laboratories; Link; Maintenance; Malignant Neoplasms; Management Information Systems; Medical Records; Mission; Modeling; Molecular Target; NCI Center for Cancer Research; Natural Language Processing; Nature; Outcome; Pathologist; Patients; Peer Review; Pharmaceutical Preparations; Phenotype; Population; Population Database; Population Sciences; Prevention; Process; Reporting; Research; Research Personnel; Research Support; Resource Informatics; Resource Sharing; Resources; Robot; Sampling; Scientist; Secure; Security; Services; Software Engineering; Software Tools; Source; Structure; System; Technology; Text; Tissue Banks; Training; Translational Research; Utah; acronyms; biobank; cancer risk; cancer therapy; cohort; college; cost; data mining; database design; database query; design; electronic data capture system; experimental study; genomic data; graphical user interface; high risk; informatics shared resource; innovation; insight; interoperability; member; molecular pathology; next generation; next generation sequencing; oncology; operation; programs; prospective; screening; software development; software systems; tool

RESEARCH INFORMATICS SHARED RESOURCE ABSTRACT The Research Informatics (RI) Shared Resource, established in 1995, provides Cancer Center members state- of-the-art software engineering, database design, and application and web development, as well as cutting- edge expertise in natural language processing, system design, data mining, and electronic data capture systems. Huntsman Cancer Institute (HCI) covers a majority of the costs of this stable, integrated team of computer professionals, enabling their allocation to the ongoing and new initiatives of highest importance to the cancer mission; priorities are determined by the HCI Director's Cabinet. Samir Courdy, BS, MBA, an accomplished computer scientist with expertise in software engineering and development of large-scale software systems, has directed the RI Shared Resource since 2006 and has managed all software development since 2000. Ms. Cindy Spigle, associate director of the RI Resource since 2011, is responsible for daily operations and assists Mr. Courdy in management. To achieve its goals, the RI Shared Resource provides computing infrastructure, hardware equipment, and services, including the latest advances in front-end graphical user interface (GUI) technologies and secure backend database engines and persistence layers. The RI Shared Resource has developed applications and databases for several other HCI-managed Shared Resources, including High-Throughput Genomics and Bioinformatic Analysis, Genetic Counseling, Biorepository and Molecular Pathology, and the Utah Population Database. The RI Shared Resource supports all four of the Cancer Center's Research Programs with the many software suites the team designs, builds, and supports. These include comprehensive suites of software applications for Cancer Clinical Research (CCR); Biospecimen Management and Annotation (itBioPath); a microarray and next-generation sequencing Laboratory Information Management System (LIMS) and experiment analysis and annotation suite (GNomEx); and a drug/chemical screening annotation and management suite (CSAM). CCR, itBioPath, and GNomEx are integrated systems providing genotype and phenotype associations for research. As software development is beyond the budget of most individual researchers, the RI Shared Resource adds important value to the Cancer Center by enabling a wide variety of researchers to utilize customized software tools without substantial financial investments. The Resource also provides cost savings to researchers by obtaining grant and institutional support to help offset software development costs. In 2013, use of the RI Shared Resource by Cancer Center members with peer-reviewed funding exceeded 57%, while the CCSG budget request is only 6% ($123,370) of the total proposed budget.

研究信息学共享资源 抽象的 研究信息学（RI）共享资源成立于1995年，为癌症中心成员提供了国家 - 艺术软件工程，数据库设计以及应用程序和网络开发以及削减 自然语言处理，系统设计，数据挖掘和电子数据捕获方面的边缘专业知识 系统。亨斯曼癌症研究所（HCI）涵盖了这个稳定，综合团队的大部分费用 计算机专业人士，使他们能够分配对持续的和新计划，对 癌症任务；优先事项由HCI主任内阁确定。萨米尔·库尔迪（Samir Courdy），学士学位，MBA， 有成就的计算机科学家，具有软件工程专业知识和大规模开发的专业知识 软件系统自2006年以来一直指导RI共享资源，并管理了所有软件 自2000年以来的发展。自2011年以来，RI资源副主任辛迪·斯皮格尔（Cindy Spigle）负责 进行日常操作，并协助Courdy先生管理。 为了实现其目标，RI共享资源提供了计算基础架构，硬件设备， 和服务，包括前端图形用户界面（GUI）技术的最新进展和安全 后端数据库引擎和持久性层。 RI共享资源开发了应用程序， 其他几种HCI管理的共享资源的数据库，包括高通量基因组学和 生物信息学分析，遗传咨询，生物措施和分子病理学以及犹他州人口 数据库。 RI共享资源支持癌症中心的所有四个研究计划 团队设计，构建和支持的许多软件套件。这些包括全面的软件套件 癌症临床研究的应用（CCR）；生物循环管理和注释（ITBIOPATH）；一个 微阵列和下一代测序实验室信息管理系统（LIMS）和 实验分析和注释套件（Gnomex）；以及药物/化学筛查注释和 管理套件（CSAM）。 CCR，ITBIOPATH和GNOMEX是提供基因型和的集成系统 研究表型协会。 由于软件开发超出了大多数个人研究人员的预算，RI共享资源 通过使各种各样的研究人员能够使用自定义，从而为癌症中心增加了重要的价值 没有大量金融投资的软件工具。资源还为节省成本节省 通过获得赠款和机构支持来帮助抵消软件开发成本，研究人员。在2013年，使用 癌症中心成员共享的RI共享资源在同行评审的资金中超过57％，而 CCSG预算要求仅为拟议预算总预算的6％（$ 123,370）。