SOFTWARE CONVERTS RAW-TYPE FILES INTO DTA? AND MGF?FILES FOR DATABASE SEARCH

软件将 RAW 类型文件转换为 DTA？

• 批准号: 8361549
• 负责人: JULIO C PADOVAN
• 金额: $ 0.13万
• 依托单位: ROCKEFELLER UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2011
• 资助国家: 美国
• 起止时间: 2011-03-01 至 2012-03-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8361549
• 关键词: Adopted; Algorithms; Computer software; Data; Databases; Funding; Grant; Laboratories; National Center for Research Resources; Principal Investigator; Proteins; Research; Research Infrastructure; Resources; Source; United States National Institutes of Health; Writing; cost; file format; graphical user interface; macromolecule; mass spectrometer; programs; research study

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. Primary support for the subproject and the subproject's principal investigator may have been provided by other sources, including other NIH sources. The Total Cost listed for the subproject likely represents the estimated amount of Center infrastructure utilized by the subproject, not direct funding provided by the NCRR grant to the subproject or subproject staff. A graphical user interface (GUI) was created for the program lcq_dta.exe to facilitate the use of the conversion software. The data conversion algorithm, lcq_dta.exe, converts data from raw file format generated by Finnigan's LCQ and LTQ mass spectrometers to files using the standard dta format. The latter format is universally adopted as the standard input type for database searches in protein identification experiments and it is used both by software written in our laboratory as well as by outside sources. The GUI is finished and in use.

该子项目是利用资源的众多研究子项目之一 由 NIH/NCRR 资助的中心拨款提供。子项目的主要支持 并且子项目的主要研究者可能是由其他来源提供的， 包括其他 NIH 来源。 子项目可能列出的总成本 代表子项目使用的中心基础设施的估计数量， NCRR 赠款不直接向子项目或子项目工作人员提供资金。 为程序lcq_dta.exe 创建了图形用户界面(GUI)，以方便转换软件的使用。数据转换算法 lcq_dta.exe 将 Finnigan 的 LCQ 和 LTQ 质谱仪生成的原始文件格式的数据转换为使用标准 dta 格式的文件。后一种格式被普遍采用作为蛋白质鉴定实验中数据库搜索的标准输入类型，并且由我们实验室编写的软件以及外部来源使用。 GUI已完成并正在使用中。