CF 1: Biospecimen Repository Core

CF 1：生物样本存储库核心

• 批准号: 10016092
• 负责人: CRISTINA R ANTONESCU
• 金额: $ 17.38万
• 依托单位: SLOAN-KETTERING INST CAN RESEARCH
• 依托单位国家: 美国
• 财政年份: 2018
• 资助国家: 美国
• 起止时间: 2018-09-01 至 2023-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/10016092
• 关键词: Animal Model; Animals; Apoptosis; Applied Research; Archives; Basic Science; Bioinformatics; Biological Assay; Biological Specimen Banks; Blood; Cancer Center; Cell Line; Cell Survival; Center Core Grants; Clinical; Clinical Research; Clinical Trials; Collaborations; Collection; Core Facility; Custom; DNA; Data; Databases; Diagnosis; Enrollment; Ensure; Evaluation; Fibrosis; Fluorescent in Situ Hybridization; Formalin; Freezing; Generations; Genes; Human; Image; Individual; Induction of Apoptosis; Infrastructure; Institutional Review Boards; Memorial Sloan-Kettering Cancer Center; Microscopic; Molecular; Morphology; Mus; Mutation; Necrosis; Normal Cell; Normal tissue morphology; Nucleic Acids; Oncogenes; Paraffin Embedding; Pathologic; Pathology; Patients; Pharmaceutical Preparations; Pharmacotherapy; Phosphorylation; Phosphotransferases; Pilot Projects; Plasma; Play; Protocols documentation; Research; Research Personnel; Research Project Grants; Resources; Role; Sampling; Scanning; Services; Soft Tissue Neoplasms; Soft tissue sarcoma; Techniques; Testing; Tissue Embedding; Tissue Microarray; Tissue Sample; Tissues; Translational Research; Xenograft Model; Xenograft procedure; central database; cost effective; design; digital; human tissue; immunohistochemical markers; mouse model; mutation screening; peripheral blood; programs; response; sarcoma; targeted sequencing; tumor

CF-1: Biospecimen Repository ABSTRACT The Biospecimen Repository Core (CF-1) is designed to provide support to the basic and translational research efforts of the SPORE. The CF-1 will play a central role in collecting, annotating, storing, distributing, and tracking of tissue and blood biospecimens from patients enrolled in research protocols. The Core will provide SPORE investigators with expert histopathological evaluation of tumor samples both from patients enrolled on research protocols and from murine and xenograft models. Additionally it will assist in selecting appropriate formalin-fixed, paraffin-embedded tissue and snap-frozen tissue for research and pilot projects, as well as enable the creation of tissue microarrays (TMAs) for SPORE investigator studies. The Core will provide assistance in performing and interpreting immunohistochemical studies and fluorescence in situ hybridization (FISH) assays. It will provide scanning and digital archiving of TMA images and reliable interpretation, scoring, and archiving of IHC results from frozen, paraffin-embedded sections or TMA sections. The core will also provide systematic assessment of tumor response to therapy in human tissues and in sarcoma murine models, including interpretation of immunohistochemical markers for drug response, such as changes in kinase phosphorylation, proliferation inhibition, and induction of apoptosis. It also provides a centralized resource for mutational annotation of sarcoma samples and cell lines using the IMPACT platform. Finally, it ensures linkage to the clinical sarcoma database in collaboration with project leaders, the bioinformatics core (CF-2 Qin/Socci) and the administrative core (Singer). This establishes a substantial infrastructure and allows us to provide the required services in a cost-effective manner. The CF-1 is tightly integrated with the MSKCC Institutional Pathology Core (supported by the MSKCC Cancer Center Core Grant) and the Clinical Research Database (CRDB) managed by the administrative core.

CF-1：生物循环库 抽象的 Biospecimen存储库核心（CF-1）旨在为基本和翻译提供支持 孢子的研究工作。 CF-1将在收集，注释，存储， 从研究方案的患者中分发和跟踪组织和血液生物测量。 核心将为孢子研究人员提供肿瘤样品的专家组织病理学评估 均来自招募研究方案的患者，以及鼠和异种移植模型。此外 它将有助于选择适当的福尔马林固定，石蜡包裹的组织和捕获的组织 研究和试点项目，以及为孢子创建组织微阵列（TMA） 研究者研究。核心将在执行和解释方面提供帮助 免疫组织化学研究和荧光原位杂交（FISH）分析。它将提供 TMA图像的扫描和数字归档以及可靠的解释，评分和归档 来自冷冻，石蜡包裹的切片或TMA切片的结果。核心还将提供系统的 评估人体组织和肉瘤鼠模型中肿瘤对治疗的反应，包括 对药物反应的免疫组织化学标记的解释，例如激酶的变化 磷酸化，增殖抑制和凋亡诱导。它还提供了集中式 使用冲击平台对肉瘤样品和细胞系进行突变注释的资源。 最后，它可以确保与项目负责人合作，与临床肉瘤数据库联系 生物信息学核心（CF-2 QIN/SOCCI）和行政核心（Singer）。这确立了实质性的 基础架构，使我们能够以经济高效的方式提供所需的服务。 CF-1是 与MSKCC机构病理学核心紧密整合（由MSKCC癌症支持 Center Core Grant）和由行政核心管理的临床研究数据库（CRDB）。