Characterization of the mechanisms underpinning quorum sensing progression in Pseudomonas aeruginosa

铜绿假单胞菌群体感应进展机制的表征

• 批准号: 10797300
• 负责人: Jon E Paczkowski
• 金额: $ 15.45万
• 依托单位: WADSWORTH CENTER
• 依托单位国家: 美国
• 财政年份: 2022
• 资助国家: 美国
• 起止时间: 2022-03-01 至 2027-01-31
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10797300
• 关键词: Architecture; Bacteria; Behavior; Binding; Cell Communication; Cell Density; Cell Signaling Process; Cells; Clinical; Communication; Communities; Complex; Detection; Development; Down-Regulation; Gene Expression; Gene Expression Profile; Genes; Infection; Ligands; Light; Mediating; Medicine; Microbial Biofilms; Mutation; Nucleic Acids; Organism; Output; Pathogenesis; Phase; Play; Production; Proteins; Pseudomonas aeruginosa; Regulation; Regulatory Element; Relaxation; Role; Shapes; Signal Transduction; Signal Transduction Pathway; Signaling Molecule; System; Transcriptional Regulation; Virulence; combat; extracellular; insight; microbial community; pathogenic bacteria; quorum sensing; receptor; receptor binding; response; rhamnolipid; surfactant

PROJECT SUMMARY Quorum sensing (QS) is a mechanism of cell-cell communication that bacteria use to orchestrate collective behaviors, including virulence and biofilm formation. QS relies on the production, release, and group-wide detection of extracellular signal molecules called autoinducers (AI). QS allows bacteria to synchronously alter gene expression patterns that underpin collective behaviors, for example, biofilm formation. Some receptors bind and respond exclusively to one AI, while others bind and respond to multiple AIs. QS is responsible for releasing public goods that are beneficial to kin and, potentially, non-kin, and as a result, it plays an important role in shaping microbial community architecture. QS is now understood to be the norm in the bacterial world. Nonetheless, how different bacterial QS receptors initiate signal transduction is not understood. Defining the mechanisms that regulate QS-mediated production of public goods will be key for generally understanding how organisms coordinate community level changes in gene expression. This is particularly important in light of our findings that P. aeruginosa QS can be activated by signals produced by non-kin. Thus, determining the mechanisms that regulate QS progression after signal recognition will allow us to understand the respective benefits and drawbacks of strict versus relaxed ligand detection in QS-mediated communication. Bacteria live in heterogeneous communities and encounter mixtures of AIs produced by themselves, their kin, and their non-kin neighbors. Upon signal recognition, LasR and RhlR activate hundreds of genes, many of which are involved in pathogenesis and biofilm formation. While some signal transduction pathways follow a linear circuit, the QS system in P. aeruginosa is best described as a dense network of receptors and regulators with interconnecting regulatory systems and outputs. Canonically, the LasR-AI complex activates expression of rhlR and rhlI, thus launching the second QS system, enabling the two QS systems to function in tandem. Surprisingly, rhlR can be upregulated in clinical isolates containing lasR inactivating mutations. RhlR can also function without its partner synthase to regulate certain genes. This is achieved via a metallo-hydrolase known as PqsE. We discovered that PqsE and RhlR interact to form a complex. We will explore the role of PqsE in regulating RhlR function and describe their tandem role in transcriptional regulation and pathogenesis in AIM 1. The progression into QS corresponds to a downregulation of certain regulatory elements that function at low cell density to potentially mitigate early entry into QS. We have discovered that Fis, which is expressed during log phase, regulates the production of rhlA, a gene responsible for the synthesis of rhamnolipids, which are a bacterial surfactant important for infections. We will explore the mechanism Fis uses to achieve this regulation, in addition to what role it might play in regulating other QS genes and behaviors in AIM 2. The acquisition of the Malvern Panalytical MicroCal PEAQ ITC will elucidate the different mechanisms that underpin quorum sensing progression as they relate to protein-protein, protein-nucleic acid, and protein-ligand interactions.

项目概要 群体感应 (QS) 是细菌用来协调集体的细胞间通信机制。 行为，包括毒力和生物膜形成。 QS依赖于生产、发布和集团范围 检测称为自诱导剂 (AI) 的细胞外信号分子。 QS让细菌同步改变 支持集体行为的基因表达模式，例如生物膜的形成。一些受体结合 并专门对一种人工智能做出反应，而另一些则与多种人工智能结合并做出反应。 QS负责发布 公共物品有利于亲属，也可能有利于非亲属，因此，它在 塑造微生物群落结构。 QS 现在被认为是细菌世界的常态。 尽管如此，不同的细菌 QS 受体如何启动信号转导尚不清楚。定义 调节 QS 介导的公共产品生产的机制将是普遍理解如何进行的关键 生物体协调群落水平的基因表达变化。鉴于我们的情况，这一点尤其重要 研究结果表明，铜绿假单胞菌 QS 可以被非亲属产生的信号激活。因此，确定 信号识别后调节 QS 进展的机制将使我们能够了解各自的 QS 介导的通讯中严格与宽松的配体检测的优点和缺点。细菌生活在 异质社区并遇到由他们自己、他们的亲属和非亲属产生的人工智能的混合物 邻居。信号识别后，LasR 和 RhlR 激活数百个基因，其中许多基因参与 发病机制和生物膜形成。虽然一些信号转导途径遵循线性电路，但 QS 铜绿假单胞菌系统最好的描述是一个由受体和调节因子组成的密集网络，这些网络相互连接 监管体系和产出。通常，LasR-AI 复合物激活 rhlR 和 rhlI 的表达，因此 启动第二个QS系统，使两个QS系统协同运作。令人惊讶的是，rhlR 可以 在含有 lasR 失活突变的临床分离株中上调。 RhlR 也可以在没有其合作伙伴的情况下发挥作用 合成酶来调节某些基因。这是通过称为 PqsE 的金属水解酶实现的。我们发现 PqsE 和 RhlR 相互作用形成复合物。我们将探讨 PqsE 在调节 RhlR 功能和 描述它们在 AIM 1 转录调控和发病机制中的串联作用。 QS 的进展 对应于某些在低细胞密度下发挥作用的调节元件的下调，以潜在地 减少提前进入 QS 的情况。我们发现 Fis 在对数期表达，调节 rhlA 的产生，这是一种负责合成鼠李糖脂的基因，鼠李糖脂是一种细菌表面活性剂 对于感染很重要。我们将探讨 Fis 实现这一监管的机制，除了什么 它在调节 AIM 2 中其他 QS 基因和行为中可能发挥的作用。收购 Malvern Panalytical MicroCal PEAQ ITC 将阐明支持群体感应进展的不同机制，因为它们 与蛋白质-蛋白质、蛋白质-核酸和蛋白质-配体相互作用有关。

项目成果

Inhibitor Mimetic Mutations in the Pseudomonas aeruginosa PqsE Enzyme Reveal a Protein-Protein Interaction with the Quorum-Sensing Receptor RhlR That Is Vital for Virulence Factor Production.

铜绿假单胞菌 PqsE 酶的抑制剂模拟突变揭示了与群体感应受体 RhlR 之间的蛋白质-蛋白质相互作用，这对于毒力因子的产生至关重要。

• 发表时间: 2021-04-16
• 影响因子: 4
• 作者: Taylor, Isabelle R;Paczkowski, Jon E;Jeffrey, Philip D;Henke, Brad R;Smith, Chari D;Bassler, Bonnie L
• 通讯作者: Bassler, Bonnie L

Resistance Is Not Futile: The Role of Quorum Sensing Plasticity in Pseudomonas aeruginosa Infections and Its Link to Intrinsic Mechanisms of Antibiotic Resistance.

耐药性并非徒劳：群体感应可塑性在铜绿假单胞菌感染中的作用及其与抗生素耐药性内在机制的联系。

• 发表时间: 2022-06-18
• 影响因子: 4.5
• 作者: Simanek, Kayla A;Paczkowski, Jon E
• 通讯作者: Paczkowski, Jon E

The PqsE-RhlR Interaction Regulates RhlR DNA Binding to Control Virulence Factor Production in Pseudomonas aeruginosa.

PqsE-RhlR 相互作用调节 RhlR DNA 结合以控制铜绿假单胞菌毒力因子的产生。

• 发表时间: 2022-02-23
• 影响因子: 3.7
• 作者: Simanek, Kayla A;Taylor, Isabelle R;Richael, Erica K;Lasek;Bassler, Bonnie L;Paczkowski, Jon E
• 通讯作者: Paczkowski, Jon E

Quorum-sensing synthase mutations re-calibrate autoinducer concentrations in clinical isolates of Pseudomonas aeruginosa to enhance pathogenesis.

群体感应合酶突变重新校准铜绿假单胞菌临床分离株中的自诱导剂浓度，以增强发病机制。

• 发表时间: 2023-12-02
• 影响因子: 16.6
• 作者: Simanek, Kayla A;Schumacher, Megan L;Mallery, Caleb P;Shen, Stella;Li, Lingyun;Paczkowski, Jon E
• 通讯作者: Paczkowski, Jon E

Structure of the RhlR-PqsE complex from Pseudomonas aeruginosa reveals mechanistic insights into quorum-sensing gene regulation.

铜绿假单胞菌 RhlR-PqsE 复合物的结构揭示了群体感应基因调控的机制。

• DOI: 10.1016/j.str.2022.10.008
• 发表时间: 2022-12-01
• 期刊: Structure
• 影响因子: 5.7
• 作者: Feathers, J. Ryan;Richael, Erica K.;Simanek, Kayla A.;Fromme, J. Christopher;Paczkowski, Jon E.
• 通讯作者: Paczkowski, Jon E.