Bioconductor: an open computing resource for genomics

Bioconductor：基因组学的开放计算资源

• 批准号: 7495201
• 负责人: ROBERT C GENTLEMAN
• 金额: $ 80.52万
• 依托单位: FRED HUTCHINSON CANCER RESEARCH CENTER
• 依托单位国家: 美国
• 财政年份: 2006
• 资助国家: 美国
• 起止时间: 2006-09-28 至 2011-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7495201
• 关键词: Address; Archives; Area; Arts; Award; Bioconductor; Bioinformatics; Biological; Biology; Biometry; Budgets; Building Codes; Class; Code; Communities; Complex; Computational Biology; Computer Simulation; Computer software; Computers; Computing Methodologies; Dana-Farber Cancer Institute; Data; Data Analyses; Data Sources; Data Storage and Retrieval; Database Management Systems; Dedications; Development; Discipline; Documentation; Educational process of instructing; Electronic Mail; Elements; Environment; Evolution; Experimental Designs; Faculty; Familiarity; FarGo; Fred Hutchinson Cancer Research Center; Funding; Genomics; Goals; Grant; Head; Human Genome; Human Resources; Individual; Informatics; Institution; Internet; Investigation; Java; Knowledge; Language; Libraries; Machine Learning; Mails; Manuscripts; Measures; Medical; Medicine; Methodology; Methods; Microarray Analysis; Motivation; Names; Nature; Numbers; Occupations; Ontology; Operative Surgical Procedures; Organism; Participant; Policies; Preparation; Principal Investigator; Probability; Procedures; Process; Program Development; Programming Languages; Provider; Public Health Schools; Publications; Range; Reader; Request for Proposals; Research; Research Infrastructure; Research Personnel; Research Project Grants; Resource Development; Resources; Role; Running; Schedule; Scientist; Sequence Alignment; Services; Software Design; Software Engineering; Solutions; Source; Standards of Weights and Measures; Statistical Methods; System; Systems Analysis; Techniques; Technology; Testing; Time; Training; Translating; Work; cluster computing; computing resources; cost; cost effective; data management; data structure; design; experience; falls; improved; innovation; interoperability; lectures; member; model development; open source; originality; professor; programs; quality assurance; research study; size; software development; success; symposium; tool; tool development; web-accessible

DESCRIPTION (provided by applicant): The Bioconductor project provides an open resource for the development and distribution of innovative reliable software for computational biology and bioinformatics. The range of available software is broad and rapidly growing as are both the user community and the developer community. The project maintains a web portal for delivering software and documentation to end users as well as an active mailing list. Additional services for developers include a software archive, mailing list and assistance and advice program development and design We propose an active development strategy designed to meet new challenges while simultaneously providing user and developer support for existing tools and methods. In particular we emphasize a design strategy that accommodates the imperfect, yet evolving nature of biological knowledge and the relatively rapid development of new experimental technologies. Software solutions must be able to rapidly adapt and to facilitate new problems when they arise.

描述（由申请人提供）：生物导体项目为开发和分发用于计算生物学和生物信息学的创新可靠软件提供了开放资源。可用软件的范围范围广泛，并且迅速增长，并且用户社区和开发人员社区也是如此。该项目维护一个Web门户网站，用于向最终用户提供软件和文档以及活动邮件列表。开发人员的其他服务包括软件档案，邮件列表以及协助以及建议计划开发和设计 我们提出了一种积极的开发策略，旨在满足新的挑战，同时为现有工具和方法提供用户和开发人员的支持。特别是我们强调了一种设计策略，该策略适应生物学知识的不完善但不断发展的本质以及新实验技术的相对迅速发展。软件解决方案必须能够快速适应并促进新问题出现。