NMRbox Platform

NMRbox平台

• 批准号: 10406892
• 负责人: JEFFREY C HOCH
• 金额: $ 24.4万
• 依托单位: UNIVERSITY OF CONNECTICUT SCH OF MED/DNT
• 依托单位国家: 美国
• 财政年份: 2015
• 资助国家: 美国
• 起止时间: 2015-09-01 至 2025-05-31
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10406892
• 关键词: Archives; Back; Bayesian Analysis; Biomolecular Nuclear Magnetic Resonance; Cloud Computing; Collaborations; Communities; Complex; Computer software; Custom; Data; Data Analyses; Data Storage and Retrieval; Deposition; Development; Ecosystem; Educational workshop; Emerging Technologies; Encapsulated; Environment; Fostering; Goals; Grant; Health Insurance Portability and Accountability Act; Infrastructure; Licensing; Link; Metadata; Occupations; Protocols documentation; Publishing; Reporting; Reproducibility; Research Personnel; Resources; Running; Services; Side; Technology; Time; Training; Universities; Update; base; clinical application; cluster computing; computational platform; computerized data processing; computing resources; dashboard; improved; meetings; novel; portability; programs; repository; tool; virtual; virtual machine; virtual platform; web server; web services

Abstract: TRD1. The NMRbox Platform is a virtual computing environment that runs on our own infrastructure and is available to the NMR community through a remote desktop connection or by download. We currently host 150+ software packages for processing and analyzing NMR data. The goal of TRD1 is to enhance the existing platform by (1) developing tools to deploy the platform, programs, and computational workflows onto cloud computing infrastructure, (2) providing a suite of user interface tools for controlling access to software, utilizing distributed computing resources, and managing groups of collaborators, and (3) provide platform enhancements that engage developers and incorporate new application types into the NMRbox ecosystem, such as HIPAA compliant workspaces. These developments empower the NMR community to tackle complex problems in biomedicine on a freely available computing infrastructure that facilitates collaboration and reproducible workflows. The technologies developed here also render the NMRbox computing infrastructure transferable to other domains where a managed computing environment is desirable.

摘要：TRD1。 NMRbox 平台是一个在我们自己的基础设施上运行的虚拟计算环境 NMR 社区可以通过远程桌面连接或下载来获取。我们目前 托管 150 多个用于处理和分析 NMR 数据的软件包。 TRD1 的目标是增强 现有平台，方法是 (1) 开发工具以将平台、程序和计算工作流程部署到 云计算基础设施，(2) 提供一套用于控制软件访问的用户界面工具， 利用分布式计算资源，管理协作者组，以及（3）提供平台 吸引开发人员并将新应用程序类型纳入 NMRbox 生态系统的增强功能， 例如符合 HIPAA 的工作空间。这些发展使 NMR 社区能够解决复杂的问题 在可免费使用的计算基础设施上解决生物医学问题，该基础设施促进协作和 可重复的工作流程。这里开发的技术还提供了 NMRbox 计算基础设施 可转移到需要托管计算环境的其他领域。