Developing and Automating an Extracellular Vesicle-Based Test for Early Detection of Hepatocellular Carcinoma

开发和自动化基于细胞外囊泡的测试以早期检测肝细胞癌

基本信息

批准号：
10823687
负责人：
Sean Xiao Liu
金额：
$ 66.16万
依托单位：
EXIMIUS DIAGNOSTICS CORP
依托单位国家：
美国
项目类别：
财政年份：
2023
资助国家：
美国
起止时间：
2023-09-14 至 2026-08-31
项目状态：
未结题

来源：
https://reporter.nih.gov/project-details/10823687
关键词：
ANXA5 gene Ablation Adopted Advanced Development Affect Alcoholic Liver Diseases Algorithms Antibodies Automation Bar Codes Bioinformatics Biological Markers Biometry Blood Circulation CD81 gene Cancer Etiology Case/Control Studies Cells Cessation of life Chemistry Chronic Hepatitis B Circulation Cirrhosis Clinical Clinical Practice Guideline DNA Detection Development Diagnosis Diagnostic Diagnostic tests Disease Early Diagnosis Etiology Excision Exhibits GPC3 gene Goals Guidelines Hepatitis B Hepatitis C Hepatology Hour Individual Joints Liver Liver Cirrhosis Liver diseases Mediating Medical center Membrane Proteins Methods Modality Motivation Oncology Operative Surgical Procedures Paper Pathology Patients Performance Phase Phospholipids Plasma Primary Malignant Neoplasm of Liver Primary carcinoma of the liver cells Process Prognosis Protein Analysis Quantitative Evaluations Recommendation Research Risk Robotics Sampling Serum Site Small Business Innovation Research Grant Specificity Specimen Surface System Systems Development TACSTD1 gene Testing Time Training Tumor-Derived Ultrasonography Validation Viral hepatitis alpha-Fetoproteins arm assay development biomarker development cell type circulating biomarkers cohort detection sensitivity diagnostic value early detection biomarkers extracellular vesicles hepatocellular carcinoma cell line in-vitro diagnostics innovation lipid nanoparticle liquid biopsy liver transplantation molecular pathology nanoparticle neoplastic cell non-alcoholic fatty liver disease novel marker predictive modeling product development robotic system technology platform tumor tumor microenvironment ultrasound

项目摘要

PROJECT SUMMARY Hepatocellular carcinoma (HCC) comprises 80-85% of primary liver cancers and frequently develops in patients with liver cirrhosis or chronic hepatitis B virus infection. HCC's poor prognosis is primarily due to advanced-stage diagnosis. Current clinical practice guidelines recommend biannual liver ultrasounds, with or without serum alpha-fetoprotein (AFP) testing, for at-risk patients to detect HCC at a curable stage. However, their accuracy is limited, with sensitivity between 60-70% and specificity of 90%. Consequently, novel biomarkers for early detection of HCC are urgently needed. Extracellular vesicles (EVs) are a heterogeneous group of lipid nanoparticles that are released by all types of cells, and even more so by tumor cells. Tumor-derived EVs are present in circulation at relatively early stages of disease and are readily accessible across all disease stages. Since the surface proteins of tumor EVs mirror those of the parental tumor cells and those cells within tumor microenvironment, exploiting the diagnostic potential of HCC EVs’ surface protein signatures as a novel biomarker for early detection of HCC holds great promise to significantly augment the ability of current diagnostic modalities. Over the last five years, our joint team comprised of Eximius Dx, UCLA, and Cedars Sinai Medical Center (CSMC) has demonstrated of HCC EV Surface Protein (SP) Test, capable of dissecting and quantifying subpopulations of HCC EVs in plasma samples. In our 2022 Hepatology paper, we summarized a phase-2 biomarker study which successfully validated the feasibility of HCC EV SP Test for early HCC detection. The long-term goal of this Direct-to-Phase-II proposal is to advance the development, optimization, and automation of the HCC EV SP Test, with the ultimate goal of establishing a more sensitive in vitro diagnostic (IVD) test based on HCC EVs. The innovation of the proposed HCC EV SP Test lies in the integration of two platform technologies: (i) EV Click MagBeads for click chemistry-mediated capture of subpopulations of HCC EVs, and (ii) real-time immuno-PCR for quantifying the captured HCC EVs. In parallel, an algorithm will be established to process the resulting HCC EV signatures into HCC EV SP score for distinguishing early-stage HCC from at-risk cirrhosis. This new IVD test will use less then 1-mL plasma and have a sample-to-answer workflow of no more than 3 hours. By adopting an in-house developed robotic system, the automated workflow allows for a throughput > 480 samples per round. Once optimized and automated the HCC EV SP Test will be validated by clinically annotated plasma samples to assess its diagnostic performance for distinguishing early-stage HCC from at-risk liver cirrhotic patients, covering etiologies including alcohol-associated liver disease (ALD), non-alcoholic fatty liver disease (NAFLD), and viral hepatitis (B/C). The successful development of the proposed HCC EV SP Test is rapidly translatable, enabling a sensitive HCC EV-based IVD test for detecting early-stage HCC.