Innovative Infrastructure to Enhance and Sustain the California Teachers Study Cohort
创新基础设施,以增强和维持加州教师研究队伍
基本信息
- 批准号:10478112
- 负责人:
- 金额:$ 102.45万
- 依托单位:
- 依托单位国家:美国
- 项目类别:
- 财政年份:2015
- 资助国家:美国
- 起止时间:2015-09-01 至 2025-08-31
- 项目状态:未结题
- 来源:
- 关键词:AchievementAddressAgeAgingAir PollutionAliquotAreaAuthorization documentationAwardBiological MarkersBlood specimenCaliforniaCessation of lifeCharacteristicsClinicalCloud ComputingCohort StudiesCollaborationsCollectionCommunitiesComplementComplexDataData AnalysesData CollectionData CommonsData MartEmergency department visitEnsureEnvironmentEnvironment DesignEnvironmental ExposureEpidemiologyEssential workerEtiologyFAIR principlesFemaleFollow-Up StudiesFoundationsFutureGoalsGreen spaceHealthHealth PlanningHealth ServicesHealth Services ResearchHospitalizationIndividualInfrastructureInpatientsLightLinkLongitudinal StudiesMaintenanceMalignant NeoplasmsManualsMedicareMedicare claimMetadataModernizationOutcomeOutpatientsParticipantPhasePositioning AttributeProcessProtocol CompliancePublic HealthReportingReproducibilityRequest for ProposalsResearchResearch PersonnelResourcesSamplingSampling StudiesSecureServicesShippingSolidSpecimenSurveysTimeUV Radiation ExposureUpdateVisualization softwareVital Statusanticancer researchapplication programming interfacebasebuilt environmentcancer epidemiologycancer riskcancer therapyclimate datacloud basedcohortcomorbiditydata modelingdata resourcedata sharingdata visualizationdata warehousedisorder riskeligible participantextreme weatherflexibilityfollow-uphandheld mobile devicehealth care service utilizationhigh riskhuman old age (65+)innovationmortalityneoplasm registryoperationpatient engagementphenotypic datapreservationprospectiveresearch studyresiliencesocialsocial vulnerabilitysurvivorshipteachervolunteervulnerable community
项目摘要
PROJECT SUMMARY / ABSTRACT
The California Teachers Study (CTS) has collected high-quality and detailed exposure, biospecimens, cancer,
and clinical endpoint data on 133,477 female volunteers followed since 1995. The cancers, hospitalizations,
and deaths to date are less than half of the total endpoints projected to occur in the CTS over the next 30
years. In the next 5 years, CTS follow-up will include over 37,000 cancers; 455,000 hospitalizations; and
41,000 deaths. This provides a solid foundation for collaborative research using these unique resources. Since
2013, the CTS collected new blood samples from 14,674 participants. Cloud computing and integrated mobile
devices generated rich phenotype data and exceptionally low pre-analytical variability for 488,000 aliquots that
are being stored as CTS follow-up continues. Since 2015, the CTS modernized its data collection, storage, and
analysis infrastructure by implementing a secure data warehouse and flexible analytics environment designed
for high-quality and integrated epidemiologic analysis. The CTS includes secure user authentication &
authorization; a collaborative workspace with documents, data visualizations, tools, and workflows; metadata;
application programming interface (API) capabilities; and a scalable data model. The CTS is now positioned to
streamline its resources for long-term sustainability. The goals of this competing renewal are to preserve
existing resources that enable research and strategically expand areas that create high-value opportunities.
First, we will maintain existing CTS data and extend passive follow-up through efficient cancer, hospitalization,
and mortality linkages. These ongoing linkages will generate additional endpoints used for future etiologic,
consortial, aging, and other research. Second, we will store the 488,000 high-quality biospecimens collected
since 2013. These specimens are all currently available to everyone; ongoing storage will ensure that they
remain available to everyone. Third, we will expand capacity by integrating additional targeted geospatial data
on climate, extreme weather, built environment, community characteristics, health access, environmental
exposures, social vulnerability, and community resilience. The new CTS infrastructure efficiently enables
everyone, regardless of their GIS expertise, to rigorously incorporate individual-level geospatial exposures into
their analyses. Fourth, because most participants are now over age 65, we will link the CTS with Medicare
outpatient data to complement existing data and expand infrastructure for aging, survivorship, comorbidity, and
health services research. The recent CTS infrastructure updates added research-ready efficiencies to manage
and process complex geospatial, administrative claims, and other CTS data in ways that help all researchers,
especially those outside the CTS, conduct integrative, rigorous, and reproducible research. The CTS is an
innovation leader with primed assets and decades of promising future research potential. This competing
renewal will maintain high-value CTS resources that can address understudied research areas, facilitate
broader use by the entire scientific community, and streamline the CTS for long-term sustainability.
项目摘要 /摘要
加利福尼亚教师研究(CTS)已收集了高质量和详细的接触,生物测量,癌症,
以及1995年以来133,477名女性志愿者的临床终点数据。癌症,住院治疗,
迄今为止的死亡不到预计在接下来30次CTS中预计发生的总终点的一半
年。在接下来的5年中,CTS随访将包括37,000多个癌症; 455,000次住院;和
41,000人死亡。这为使用这些独特资源的协作研究奠定了坚实的基础。自从
2013年,CTS收集了14,674名参与者的新血液样本。云计算和集成的手机
设备生成了丰富的表型数据和488,000个等分试样的分析前变异性极低
随着CTS随访的继续,正在存储。自2015年以来,CTS现代化了其数据收集,存储和
通过实施安全的数据仓库和灵活的分析环境,分析基础架构设计
用于高质量和综合流行病学分析。 CTS包括安全的用户身份验证&
授权;与文档,数据可视化,工具和工作流程的协作工作空间;元数据;
应用程序编程接口(API)功能;和可扩展的数据模型。 CTS现在位于
简化其资源以实现长期可持续性。这种竞争更新的目标是保存
现有资源,使研究并在战略上扩大创造高价值机会的领域。
首先,我们将维护现有的CTS数据,并通过大型癌症,住院,扩展被动随访
和死亡率联系。这些持续的链接将产生用于未来病因的其他端点,
财团,衰老和其他研究。其次,我们将存储收集的488,000个高质量的生物测量
自2013年以来。这些标本目前都可供所有人使用;正在进行的存储将确保他们
仍然可以为每个人提供。第三,我们将通过集成其他有针对性的地理空间数据来扩大容量
关于气候,极端天气,建筑环境,社区特征,健康获取,环境
暴露,社会脆弱性和社区韧性。新的CTS基础架构有效启用
不管他们的GIS专业知识如何
他们的分析。第四,因为大多数参与者现在已经超过65岁,所以我们将与Medicare联系起来
门诊数据以补充现有数据并扩大衰老,生存,合并症和合并症的基础架构
卫生服务研究。最近的CTS基础架构更新添加了准备就绪的效率来管理
并以帮助所有研究人员的方式处理复杂的地理空间,行政主张和其他CTS数据
特别是在CT之外的人,进行综合,严格和可再现的研究。 CTS是
具有启动资产的创新领导者以及几十年来有希望的未来研究潜力。这个竞争
更新将维护高价值的CTS资源,以解决研究领域的研究领域,促进
整个科学界的更广泛使用,并简化CTS的长期可持续性。
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
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James V Lacey其他文献
Differences in polygenic score distributions in European ancestry populations: implications for breast cancer risk prediction
欧洲血统人群多基因评分分布的差异:对乳腺癌风险预测的影响
- DOI:
10.1101/2024.02.12.24302043 - 发表时间:
2024 - 期刊:
- 影响因子:0
- 作者:
Kristia Yiangou;N. Mavaddat;J. Dennis;M. Zanti;Qin Wang;M. Bolla;Mustapha Abubakar;T. Ahearn;I. Andrulis;H. Anton;N. Antonenkova;V. Arndt;K. Aronson;A. Augustinsson;Adinda Baten;S. Behrens;M. Bermisheva;Amy Berrington de González;K. Białkowska;N. Boddicker;C. Bodelón;N. Bogdanova;S. Bojesen;K. Brantley;H. Brauch;H. Brenner;Nicola J. Camp;F. Canzian;J. Castelao;Melissa H. Cessna;J. Chang;G. Chenevix;Wendy K. Chung;Sarah V Colonna;F. Couch;A. Cox;Simon S. Cross;K. Czene;M. Daly;P. Devilee;T. Dörk;A. Dunning;Diana M. Eccles;A. Eliassen;Christoph Engel;M. Eriksson;D. G. Evans;Peter A. Fasching;O. Fletcher;H. Flyger;L. Fritschi;M. Gago;A. Gentry;A. González;P. Guénel;E. Hahnen;C. Haiman;U. Hamann;Jaana M. Hartikainen;Vikki Ho;James M. Hodge;A. Hollestelle;E. Honisch;M. Hooning;Reiner Hoppe;J. Hopper;Sacha J. Howell;A. Howell;Simona Jakovchevska;A. Jakubowska;H. Jernström;N. Johnson;Rudolf Kaaks;Elza K. Khusnutdinova;C. Kitahara;Stella Koutros;V. Kristensen;James V Lacey;D. Lambrechts;F. Lejbkowicz;A. Lindblom;M. Lush;A. Mannermaa;Dimitrios Mavroudis;Usha Menon;Rachel Murphy;H. Nevanlinna;Nadia Obi;K. Offit;Tjoung;A. Patel;Cheng Peng;P. Peterlongo;G. Pita;D. Plaseska‐Karanfilska;K. Pylkäs;P. Radice;M. U. Rashid;Gadi Rennert;Eleanor Roberts;Juan Rodriguez;A. Romero;E. Rosenberg;E. Saloustros;Dale P. Sandler;E. Sawyer;Rita Schmutzler;C. Scott;X. Shu;M. Southey;Jennifer Stone;Jack A. Taylor;Lauren R. Teras;I. van de Beek;Walter Willett;R. Winqvist;W. Zheng;C. Vachon;M. Schmidt;Per Hall;R. MacInnis;R. Milne;Paul D. P. Pharoah;J. Simard;A. Antoniou;Douglas F. Easton;K. Michailidou - 通讯作者:
K. Michailidou
Association of tea and coffee consumption and biliary tract cancer risk: The Biliary Tract Cancers Pooling Project
茶和咖啡消费与胆道癌风险的关联:胆道癌汇集项目
- DOI:
- 发表时间:
2023 - 期刊:
- 影响因子:13.5
- 作者:
Yu;E. Loftfield;Ilona Argirion;Hans;D. Albanes;A. T. Chan;V. Fedirko;G.E. Fraser;Neal D. Freedman;Graham G. Giles;Patricia Hartge;Verena A. Katzke;S. Knutsen;James V Lacey;Linda M. Liao;Juhua Luo;R. Milne;K. O’Brien;Ulrike Peters;J. Poynter;M. Purdue;K. Robien;Sven Sandin;Dale P. Sandler;V. Setiawan;Jae H. Kang;Tracey G. Simon;Rashmi Sinha;T. VoPham;S. Weinstein;Emily White;Xuehong Zhang;Bin Zhu;K. McGlynn;P. Campbell;Mei;J. Koshiol - 通讯作者:
J. Koshiol
A likelihood ratio approach for utilizing case-control data in the clinical classification of rare sequence variants: application to BRCA1 and BRCA2.
在罕见序列变异的临床分类中利用病例对照数据的似然比方法:应用于 BRCA1 和 BRCA2。
- DOI:
10.1155/2023/9961341 - 发表时间:
2023 - 期刊:
- 影响因子:3.9
- 作者:
M. Zanti;Denise G. O’Mahony;Michael T. Parsons;Hongyan Li;J. Dennis;Kristiina Aittomäkkiki;I. Andrulis;H. Anton;K. Aronson;A. Augustinsson;Heiko Becher;S. Bojesen;M. Bolla;H. Brenner;Melissa A. Brown;S. Buys;F. Canzian;S. Caputo;J. Castelao;J. Chang;GC;K. Czene;M. Daly;Arcangela De Nicolo;P. Devilee;T. Dörk;A. Dunning;M. Dwek;D. Eccles;C. Engel;David Evans;P. Fasching;M. Gago;M. García;J. García;A. Gentry;Willemina R. R. Geurts ;G. Giles;G. Glendon;M. Goldberg;E. G. Gómez Garcia;Melanie Güendert;P. Guénel;E. Hahnen;C. Haiman;P. Hall;U. Hamann;E. Harkness;Frans B. L. Hogervorst;A. Hollestelle;Reiner Hoppe;J. Hopper;C. Houdayer;R. Houlston;A. Howell;ABCTB Investigators;M. Jakimovska;A. Jakubowska;H. Jernström;E. John;R. Kaaks;C. Kitahara;Stella Koutros;P. Kraft;V. Kristensen;James V Lacey;D. Lambrechts;M. Léoné;A. Lindblom;J. Lubiński;M. Lush;A. Mannermaa;M. Manoochehri;S. Manoukian;S. Margolin;M. E. Martinez;Usha Menon;R. Milne;A. Monteiro;R. A. Murphy;S. Neuhausen;H. Nevanlinna;W. G. Newman;K. Offit;Sue;P. James;P. Peterlongo;J. Peto;D. Plaseska‐Karanfilska;K. Punie;P. Radice;Muhammad Abo ul Hassan Rashid;G. Rennert;A. Romero;E. Rosenberg;E. Saloustros;D. Sandler;M. Schmidt;R. Schmutzler;X. Shu;J. Simard;M. Southey;J. Stone;D. Stoppa;R. Tamimi;W. Tapper;Jack A. Taylor;Soo;Lauren R. Teras;M. Terry;M. Thomassen;M. Troester;C. Vachon;Ana Vega;M. Vreeswijk;Qin Wang;B. Wappenschmidt;C. R. Weinberg;A. Wolk;W. Zheng;Bing;F. Couch;A. Spurdle;D. Easton;D. Goldgar;K. Michailidou - 通讯作者:
K. Michailidou
James V Lacey的其他文献
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{{ truncateString('James V Lacey', 18)}}的其他基金
Genome-wide genotyping of existing samples from Asian American and Pacific Islander participants in the California Teachers Study cohort to facilitate broad and open future research
对加州教师研究队列中亚裔美国人和太平洋岛民参与者的现有样本进行全基因组基因分型,以促进广泛和开放的未来研究
- 批准号:
10408476 - 财政年份:2015
- 资助金额:
$ 102.45万 - 项目类别:
Innovative Infrastructure to Enhance and Sustain the California Teachers Study Cohort
创新基础设施,以增强和维持加州教师研究队伍
- 批准号:
10686141 - 财政年份:2015
- 资助金额:
$ 102.45万 - 项目类别:
Innovative Infrastructure to Enhance and Sustain the California Teachers Study Cohort
创新基础设施,以增强和维持加州教师研究队伍
- 批准号:
10259758 - 财政年份:2015
- 资助金额:
$ 102.45万 - 项目类别:
Genome-wide genotyping of existing samples in the California Teachers Study cohort from under-represented racial & ethnic minority groups to facilitate broad and open future research
对加州教师研究队列中代表性不足的种族的现有样本进行全基因组基因分型
- 批准号:
10629670 - 财政年份:2015
- 资助金额:
$ 102.45万 - 项目类别:
Innovative Infrastructure to Enhance and Sustain the California Teachers Study Cohort
创新基础设施,以增强和维持加州教师研究队伍
- 批准号:
10053181 - 财政年份:2015
- 资助金额:
$ 102.45万 - 项目类别:
A More Perfect Union: Leveraging Clinically Deployed Models and Cancer Epidemiology Cohort Data to Improve AI/ML Readiness of NIH-Supported Population Sciences Resources
更完美的联盟:利用临床部署的模型和癌症流行病学队列数据来提高 NIH 支持的人口科学资源的 AI/ML 准备情况
- 批准号:
10594304 - 财政年份:2015
- 资助金额:
$ 102.45万 - 项目类别:
Oil and Gas as Drivers of Climate Change and Health: Developing unique resources to investigate multi-level and diverse effects of exposure to oil and gas wells
石油和天然气作为气候变化和健康的驱动因素:开发独特的资源来调查接触石油和天然气井的多层次和多样化的影响
- 批准号:
10839157 - 财政年份:2015
- 资助金额:
$ 102.45万 - 项目类别:
New Biospecimens to Enhance Research in the California Teachers Study Cohort
新的生物样本将加强加州教师研究队列的研究
- 批准号:
8550025 - 财政年份:2012
- 资助金额:
$ 102.45万 - 项目类别:
New Biospecimens to Enhance Research in the California Teachers Study Cohort
新的生物样本将加强加州教师研究队列的研究
- 批准号:
8374426 - 财政年份:2012
- 资助金额:
$ 102.45万 - 项目类别:
New Biospecimens to Enhance Research in the California Teachers Study Cohort
新的生物样本将加强加州教师研究队列的研究
- 批准号:
8917892 - 财政年份:2012
- 资助金额:
$ 102.45万 - 项目类别:
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