Porin bearing the protease activity : its structure and function

具有蛋白酶活性的孔蛋白:其结构和功能

基本信息

项目摘要

We found out that protein D2 (OprD) porin in the outer membrane of Pseudomonas aeruginosa bears the protease activity. This was concluded from the following results. (a) Highly purified OprD sample hydrolyzed the synthetic peptides according to the Michaelis-Menten kinetics, (b), diisopropyl fluorophosphate (DFP), an inhibitor specific for serine protease, inhibited the hydrolytic activity and bound covalently with OprD protein, and (c), monoclonal antibody raised against OprD protein inhibited the protease activity in a concentration-dependent manner. However, one may suspect that the protease activity may be mediated by very small amounts of protease (s) in the OprD preparation. Therefore, in order to demonstrate conclusively the protease activity in OprD protein and simultaniouly identfy the catalytic residues of OprD protease, we constructed the mutant OprD proteins with the substitution of His156, Asp208 or Ser296 with glutamine, asparagine or alanine, respectively since these amino acids were predicted to be catalytic triad constituents from the comparison analysisi of the amino acid sequence between OprD and serine protease such as trypsin. The wild-type and mutant OprD proteins expressed in the outer membrane of these strains were purified to be homogeneity and were subjected to the protease assay. Consequently all the three mutants were shown to have the protease activity with less than 0.1% of the wild-type OprD activity. This result demonstrates conclusively that OprD protein itselu has the protease and that His156, Asp208 and Ser296 residues are the constituents of the catalytic triad of OprD protease. Furthermore, we studied the role of these catalytic residues to the interaction with imipenem, one of carbapenems since the OprD was shown to have the binding site to imipenem. Susceptiblities of these mutant strains agains imipem showed that His156 and Asp208 but not Ser296 may have some role for the fasilitaed diffusion of imipem through OprD protein.
我们发现,铜绿假单胞菌外膜中的蛋白D2(OPRD)旋转具有蛋白酶活性。从以下结果得出结论。 (a) Highly purified OprD sample hydrolyzed the synthetic peptides according to the Michaelis-Menten kinetics, (b), diisopropyl fluorophosphate (DFP), an inhibitor specific for serine protease, inhibited the hydrolytic activity and bound covalently with OprD protein, and (c), monoclonal antibody raised against OprD protein inhibited the protease activity in a浓度依赖性方式。但是,可能会怀疑蛋白酶活性可能是由OPRD制剂中少量蛋白酶介导的。因此,为了结论性地证明OPRD​​蛋白和同时识别OPRD蛋白酶的催化残基的蛋白酶活性,我们用His156,Asp208或Ser296代替了这些突变的OPRD蛋白,用谷氨酰胺,天素酸是育种,因为它们是抗分裂性的,因为它们是在谷氨酰胺,氨基酸方面的分析。 OPRD和丝氨酸蛋白酶(如胰蛋白酶)之间的氨基酸序列的。在这些菌株的外膜中表达的野生型和突变型OPRD蛋白被纯化为均匀性,并经过蛋白酶测定。因此,所有这三个突变体均显示出蛋白酶活性,而野生型OPRD活性的0.1%。该结果表明,OPRD蛋白Itselu具有蛋白酶,HIS156,ASP208和SER296残基是OPRD蛋白酶催化三合会的组成部分。此外,我们研究了这些催化残基在与咪毕烯的相互作用中的作用,这是碳青霉烯之一,因为OPRD被证明具有与丙咪苯成具有结合位点。这些突变菌株的敏感性再次表明,His156和Asp208而不是Ser296可能对Imipem通过OPRD蛋白的Fasilita扩散起作用。

项目成果

期刊论文数量(6)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
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Nakae, T., Yoshihara, E., Yoneyama, H.And Ishii J.: "Protein D2, a multifuctional channel-forming outer membrane protein of Pseudomonas aeruginosa" Molecular Biology of Pseudomonads (Nakazawa et al.Eds). 363-370 (1996)
Nakae, T.、Yoshihara, E.、Yoneyama, H. 和 Ishii J.:“蛋白质 D2,铜绿假单胞菌的多功能通道形成外膜蛋白”假单胞菌分子生物学(Nakazawa 等编辑)。
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Yoshihara, E., Gotoh, N., Nishino, T.And Nakae, T.: "Protein D2 porin of the Pseudomonas aeruginosa outer membrane bears the protease activity" FEBS Letters. 394. 179-182 (1996)
Yoshihara, E.、Gotoh, N.、Nishino, T. 和 Nakae, T.:“铜绿假单胞菌外膜的蛋白质 D2 孔蛋白具有蛋白酶活性”FEBS 快报。
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Nakae,Yoshihara et al.: "Protein D2,a multifunctional channel-forming outer membrane protein of Pseudomonas aeruginosa" Molecular Biology of Pseudomonads(Nakazawa et al.Eds). 363-370 (1996)
Nakae,Yoshihara 等人:“蛋白质 D2,铜绿假单胞菌的多功能通道形成外膜蛋白”假单胞菌的分子生物学(Nakazawa 等人编辑)。
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Nakae,Yoshihara,et al.: "Protein D2,a multifunctional channel-forming outer membrane protein of Pseudomonas aeruginosa" Molecular Biology of Pseudomonads (Nakazawa et al. Eds). 363-370 (1996)
Nakae,Yoshihara 等人:“蛋白质 D2,铜绿假单胞菌的多功能通道形成外膜蛋白”假单胞菌的分子生物学(Nakazawa 等人编辑)。
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Yoshihara,E,et al.: "Protein D2 porin of the Pseudomonas aeruginosa outer membrane bears the protease activity" FEBS Letters. 394. 179-182 (1996)
Yoshihara,E,et al.:“铜绿假单胞菌外膜的蛋白质 D2 孔蛋白具有蛋白酶活性”FEBS Letters。
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前往

YOSHIHARA Eisaku的其他基金

Development of antibodies and small molecules as inhibitors ofPseudomonas aeruginosa multidrug efflux pumps
开发作为铜绿假单胞菌多药外排泵抑制剂的抗体和小分子
  • 批准号:
    19590458
    19590458
  • 财政年份:
    2007
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
    Grant-in-Aid for Scientific Research (C)
Discovery of the extracellular loops being essential for the proper function of the multidrug efflux pump suggests that the loops may be an excellent target for the pump inhibitor
细胞外环的发现对于多药物外排泵的正常功能至关重要,这表明环可能是泵抑制剂的极好靶标
  • 批准号:
    17590402
    17590402
  • 财政年份:
    2005
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
    Grant-in-Aid for Scientific Research (C)
The elucidation of the molecular assembly mechanism of the multidrug efflux pump and the development of the screening system for pump inhibitors
多药外排泵分子组装机制的阐明及泵抑制剂筛选体系的开发
  • 批准号:
    14570245
    14570245
  • 财政年份:
    2002
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
    Grant-in-Aid for Scientific Research (C)
The outer membrane components of xenobiotic efflux pumps are discovered to be members of a novel channel family with the unique structure
外源物质外排泵的外膜成分被发现是具有独特结构的新型通道家族的成员
  • 批准号:
    11670275
    11670275
  • 财政年份:
    1999
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
    Grant-in-Aid for Scientific Research (C)
Elucidation of the molecular structure of OprD porin bearing the protease activity and the discovery of theporin homologous with OprD
阐明具有蛋白酶活性的OprD孔蛋白的分子结构并发现与OprD同源的孔蛋白
  • 批准号:
    09670299
    09670299
  • 财政年份:
    1997
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
    Grant-in-Aid for Scientific Research (C)
Molecular and structural mechanism of the gating of the porin channel
孔蛋白通道门控的分子和结构机制
  • 批准号:
    05670267
    05670267
  • 财政年份:
    1993
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (C)
    Grant-in-Aid for General Scientific Research (C)

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    82300621
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相似海外基金

Pseudomonas aeruginosa Outer Membrane Protein Modeling
铜绿假单胞菌外膜蛋白模型
  • 批准号:
    7189888
    7189888
  • 财政年份:
    2005
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
Pseudomonas aeruginosa Outer Membrane Protein Modeling
铜绿假单胞菌外膜蛋白模型
  • 批准号:
    7367033
    7367033
  • 财政年份:
    2005
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
Pseudomonas aeruginosa Outer Membrane Protein Modeling
铜绿假单胞菌外膜蛋白模型
  • 批准号:
    7577444
    7577444
  • 财政年份:
    2005
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
Molecular and structural mechanism of the gating of the porin channel
孔蛋白通道门控的分子和结构机制
  • 批准号:
    05670267
    05670267
  • 财政年份:
    1993
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (C)
    Grant-in-Aid for General Scientific Research (C)
The permeability specificity of the imipenem-specific channel of OprD2 in Pseudomonas aeruginosa
铜绿假单胞菌中OprD2亚胺培南特异性通道的通透性特异性
  • 批准号:
    05454195
    05454195
  • 财政年份:
    1993
  • 资助金额:
    $ 1.6万
    $ 1.6万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (B)
    Grant-in-Aid for General Scientific Research (B)