Clonal Hematopoiesis in Healthy Individuals from Families with Early OnsetCoronary Artery Disease
早发冠状动脉疾病家族的健康个体的克隆性造血
基本信息
- 批准号:9760677
- 负责人:
- 金额:$ 85.14万
- 依托单位:
- 依托单位国家:美国
- 项目类别:
- 财政年份:2019
- 资助国家:美国
- 起止时间:2019-05-01 至 2023-04-30
- 项目状态:已结题
- 来源:
- 关键词:AgeAge-YearsAgingArteriesAtherosclerosisBiological AgingBlood VesselsBlood specimenCandidate Disease GeneCardiovascular DiseasesCardiovascular systemCell LineageCell modelCellsChronologyClinicalClonal ExpansionCommunitiesCoronary ArteriosclerosisCoronary heart diseaseCultured CellsDNA Sequence AlterationDiseaseEventExhibitsFamilyFamily history ofFirst Degree RelativeFramingham Heart StudyGene SilencingGeneral PopulationGenesGenetic Predisposition to DiseaseGoalsHematologic NeoplasmsHematopoiesisHematopoietic stem cellsHeritabilityHigh PrevalenceIn VitroIncidenceIndividualJackson Heart StudyKnockout MiceLengthLeukocytesMalignant NeoplasmsMusMutationNational Heart, Lung, and Blood InstituteOncogenicParentsPhenotypePopulationPopulation StudyPremature aging syndromePrevalenceProcessRaceRecording of previous eventsRiskRisk FactorsSiblingsSomatic MutationStrokeTERF1 geneTINF2 geneTelomeraseTelomere ShorteningTimeTrans-Omics for Precision MedicineUrsidae FamilyVariantatherosclerosis riskcancer riskcardiovascular risk factorcohortcoronary calcium scoringdensitydesigndisorder riskearly onsetexome sequencinggain of functiongenetic epidemiologygenetic variantgenome sequencingin vivoloss of functionmembermortalitymouse modelnoveloffspringoverexpressionpre-clinicalprematureprobandprogramsprospectivesextelomerewhole genome
项目摘要
Clonal hematopoiesis (CH) occurs with aging and is associated with increased mortality, a 10-fold increase of
incident cancers, and a >2 fold increase in coronary artery disease (CAD) and stroke. In CH a significant
proportion of circulating leukocytes are derived from a single dominant hematopoietic stem cell (HSC) lineage.
Somatic mutations in oncogenic driver and other genes may be responsible. CH is also associated with
shortened leukocyte telomere length (LTL) and accompanies biological aging and its effects, independent of
chronological age. Healthy first degree relatives from families with early-onset CAD demonstrate premature
aging cardiovascular phenotypes and bear a risk for incident CAD that is 2-12 times that of the general
population. These early-onset CAD families have highly heritable shortened LTL at young ages, and higher
rates of cancer. They may also have an increased prevalence of CH for their age, possibly contributing
mechanistically to CAD risk. We posit that populations with increased genetic susceptibility to early CAD and
shorter telomeres exhibit early-onset biological aging and have a higher prevalence of clinically silent CH,
which in turn may contribute to both atherosclerosis and cancer risk. No studies have investigated this
hypothesis in families with early-onset CAD, a putatively highly susceptible population. Our hypothesis is that a
family history of early CAD conveys a higher prevalence of CH and shorter LTL for age, contributing
mechanistically to a potent atherosclerosis substrate, with greater CAC score and higher rates of incident CAD.
We will determine the prevalence of CH in 1610 subjects from GeneSTAR, healthy siblings, offspring or
parents of probands with CAD < 60 years of age, using whole genome sequencing. We will determine whether
CH is related to shortened LTL, to CAD events, and to CAC scores, and further whether the prevalence of CH
is greater by age in subjects from families with and without early-onset CAD history in population studies
(Framingham Heart Study, Multiethnic Study of Atherosclerosis, Jackson Heart Study, and the Atherosclerosis
in Communities Study) in the NHLBI Trans-Omics for Precision Medicine (TOPMed) Program, of which
GeneSTAR is a member. We will identify germline and somatic variants associated with LTL and determine the
extent to which these are a function of family history of early CAD. Variants in candidate genes known to
regulate LTL, including telomerase genes and shelterin genes will be given priority in the analysis. We are also
examining increments in CH mutations and the LTL attrition rate over 6-20 years in the GeneSTAR families.
For the highest priority genetic variants, we will ascertain functional significance as potential drivers of CH
using gain-of-function (over-expression) and loss-of-function (gene silencing) approaches to assess their effect
on proliferation and clonal expansion in cellular and in vivo murine models, and effects on atherosclerosis in
Ldlr knockout mice. This novel combination of genetic epidemiology and functional studies will elucidate a
potentially new mechanism for premature aging and its early-onset cardiovascular disease substrate.
克隆性造血(CH)随着衰老而发生,并与死亡率增加相关,死亡率增加 10 倍
癌症发病率增加 2 倍以上,冠状动脉疾病 (CAD) 和中风的发病率增加 2 倍以上。在 CH 中,显着
部分循环白细胞源自单一显性造血干细胞 (HSC) 谱系。
致癌驱动基因和其他基因的体细胞突变可能是造成这种情况的原因。 CH 还与
白细胞端粒长度 (LTL) 缩短并伴随生物衰老及其影响,与
实际年龄。来自患有早发性 CAD 家族的健康一级亲属表现出早发性
心血管表型老化,发生 CAD 的风险是一般人的 2-12 倍
人口。这些早发 CAD 家族在年轻时具有高度遗传性的缩短 LTL,并且更高
癌症的发生率。与他们的年龄相比,他们的 CH 患病率也可能有所增加,这可能导致
机械地降低CAD风险。我们假设早期 CAD 遗传易感性增加的人群
较短的端粒表现出早发性生物衰老,并且临床无症状 CH 的患病率较高,
这反过来又可能导致动脉粥样硬化和癌症风险。没有研究对此进行调查
早发性 CAD 家族(被认为是高度易感人群)的假设。我们的假设是
早期 CAD 家族史表明 CH 患病率较高,LTL 较短,这有助于
从机制上讲,它是一种有效的动脉粥样硬化底物,具有更高的 CAC 评分和更高的 CAD 发病率。
我们将确定来自 GeneSTAR 的 1610 名受试者、健康兄弟姐妹、后代或
使用全基因组测序,对年龄 < 60 岁患有 CAD 先证者的父母进行研究。我们将确定是否
CH 与缩短的 LTL、CAD 事件和 CAC 评分相关,并且进一步确定 CH 的患病率是否与
在人口研究中,来自有或没有早发 CAD 家族史的受试者的年龄更大
(弗雷明汉心脏研究、动脉粥样硬化多种族研究、杰克逊心脏研究和动脉粥样硬化
社区研究博士)在 NHLBI 精准医学跨组学 (TOPMed) 计划中,其中
GeneSTAR 是会员。我们将鉴定与 LTL 相关的种系和体细胞变异,并确定
这些在多大程度上是早期 CAD 家族史的函数。已知候选基因的变异
调控LTL的基因,包括端粒酶基因和shelterin基因将被优先分析。我们也是
检查 GeneSTAR 家族 6-20 年间 CH 突变的增量和 LTL 损耗率。
对于最优先的遗传变异,我们将确定其作为 CH 潜在驱动因素的功能意义
使用功能获得(过度表达)和功能丧失(基因沉默)方法来评估其效果
对细胞和体内小鼠模型中增殖和克隆扩张的影响,以及对动脉粥样硬化的影响
Ldlr 基因敲除小鼠。这种遗传流行病学和功能研究的新颖结合将阐明
过早衰老及其早发性心血管疾病的潜在新机制。
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
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Lewis C Becker其他文献
A framework for detecting noncoding rare variant associations of large-scale whole-genome sequencing studies
用于检测大规模全基因组测序研究的非编码稀有变异关联的框架
- DOI:
- 发表时间:
2021 - 期刊:
- 影响因子:0
- 作者:
Zilin Li;Xihao Li;Hufeng Zhou;S. Gaynor;M. Selvaraj;Theodore Arapoglou;Corbin Quick;Yaowu Liu;Han Chen;Ryan Sun;Rounak Dey;D. Arnett;P. Auer;L. Bielak;J. Bis;T. Blackwell;J. Blangero;E. Boerwinkle;D. Bowden;Jennifer A. Brody;B. Cade;M. Conomos;A. Correa;L. Cupples;J. Curran;P. D. de Vries;R. Duggirala;N. Franceschini;B. Freedman;H. Göring;Xiuqing Guo;Rita R. Kalyani;C. Kooperberg;B. Kral;Leslie A. Lange;Bridget M. Lin;A. Manichaikul;Alisa K Manning;Lisa W. Martin;R. Mathias;J. Meigs;B. Mitchell;May E. Montasser;A. Morrison;T. Naseri;Jeffrey R. O’Connell;Nicholette D. Palmer;P. Peyser;B. Psaty;L. Raffield;S. Redline;Alexander P. Reiner;M. Reupena;K. Rice;S. Rich;Jennifer A. Smith;K. Taylor;M. Taub;R. Vasan;D. Weeks;James G. Wilson;L. Yanek;Wei Zhao;Namiko Gonçalo Francois Christine Laura Alvaro Seth Peter Abe Abecasis Aguet Albert Almasy Alonso Ament Ande;Namiko Abe;Gonçalo R. Abecasis;F. Aguet;Christine Albert;L. Almasy;Álvaro Alonso;S. Ament;Peter Anderson;Pramod Anugu;Deborah Applebaum;K. Ardlie;D. Arking;Allison Ashley;S. Aslibekyan;T. Assimes;D. Avramopoulos;Najib T Ayas;Adithya Balasubramanian;John Barnard;Kathleen C. Barnes;R. G. Barr;E. Barron;L. Barwick;T. Beaty;Gerald Beck;Diane M. Becker;Lewis C Becker;Rebecca L. Beer;A. Beitelshees;Emelia J. Benjamin;Takis Benos;Marcos Bezerra;Nathan Blue;Russell P Bowler;U. Broeckel;J. Broome;Deborah L. Brown;Karen L. Bunting;Esteban G. Burchard;Carlos Bustamante;Erin J. Buth;J. Cardwell;V. Carey;J. Carrier;April P. Carson;C. Carty;R. Casaburi;Juan P. Casas Romero;James M. Casella;Peter J. Castaldi;M. Chaffin;Christy Chang;Yi;D. Chasman;S. Chavan;Bo;Wei;Yii;Michael Cho;S. Choi;Lee;M. Chung;R. Chung;C. Clish;S. Comhair;E. Cornell;Carolyn Crandall;J. Crapo;J. Curtis;B. Custer;C. Damcott;D. Darbar;S. David;Colleen P. Davis;M. Daya;M. de Andrade;L. Fuentes;Michael R. DeBaun;R. Deka;D. Demeo;Scott Devine;H. Dinh;H. Doddapaneni;Q. Duan;Shannon Dugan;J. P. Durda;S. Dutcher;Charles B. Eaton;L. Ekunwe;A. El Boueiz;P. Ellinor;L. Emery;S. Erzurum;Charles Farber;J. Farek;T. Fingerlin;M. Flickinger;M. Fornage;C. Frazar;Mao Fu;Stephanie M. Fullerton;L. Fulton;S. Gabriel;Weiniu Gan;Shanshan Gao;Yan Gao;Margery L S Gass;Heather Geiger;Bruce Gelb;M. Geraci;S. Germer;R. Gerszten;Auyon J. Ghosh;Richard A. Gibbs;Chris Gignoux;M. Gladwin;David C. Glahn;S. Gogarten;Dawei Gong;S. Graw;Kathryn J. Gray;Daniel Grine;Colin Gross;C. Gu;Y. Guan;N. Gupta;Michael N. Hall;Yi Han;Patrick J Hanly;Daniel N Harris;N. Hawley;Jiang He;Benjamin D. Heavner;S. Heckbert;Ryan Hernandez;David M. Herrington;C. Hersh;Bertha A Hidalgo;J. Hixson;B. Hobbs;John Hokanson;Elliott Hong;K. Hoth;Chao A. Hsiung;Jianhong Hu;Y. Hung;H. Huston;C. Hwu;M. Irvin;Rebecca D. Jackson;D. Jain;C. Jaquish;J. Johnsen;A. Johnson;C. Johnson;R. Johnston;Kimberly Jones;H. M. Kang;R. Kaplan;S. Kardia;Shannon Kelly;E. Kenny;Michael Kessler;Alyna T Khan;Ziad Khan;Wonji Kim;J. Kimoff;G. Kinney;Barbara Konkle;Holly B. Kramer;Christoph Lange;Ethan Lange;Cathy C. Laurie;C. Laurie;M. LeBoff;Jiwon Lee;Sandra Lee;Wen;J. Lefaive;David Levine;Dan Levy;J. Lewis;Xiaohui Li;Yun Li;Henry J. Lin;Honghuang Lin;Simin Liu;Yongmei Liu;Yu Liu;R. F. Loos;S. Lubitz;K. Lunetta;James Luo;U. Magalang;Michael P. Mahaney;Barry J. Make;J. Manson;Melissa A Marton;S. Mathai;Susanne May;P. McArdle;Merry;Sean K. McFarland;Daniel J. McGoldrick;Caitlin P. McHugh;B. McNeil;H. Mei;Vipin A. Menon;L. Mestroni;G. Metcalf;D. Meyers;Emmanuel Mignot;Julie Mikulla;N. Min;Mollie A Minear;R. Minster;M. Moll;Z. Momin;C. Montgomery;D. Muzny;J. Mychaleckyj;Girish Nadkarni;Rakhi Naik;S. Nekhai;Sarah C. Nelson;Bonnie Neltner;C. Nessner;Deborah Nickerson;Osuji Nkechinyere;K. North;T. O’Connor;H. Ochs;Geoffrey O. Okwuonu;Allan I. Pack;D. Paik;J. Pankow;G. Papanicolaou;Cora Parker;J. Peralta;Marco V. Perez;James Perry;U. Peters;Lawrence S. Phillips;Jacob Pleiness;T. Pollin;Wendy S. Post;Julia Powers Becker;M. Boorgula;Michael H. Preuss;P. Qasba;D. Qiao;Z. Qin;N. Rafaels;M. Rajendran;D. Rao;L. Rasmussen;A. Ratan;Robert M Reed;C. Reeves;E. Regan;R. Robillard;N. Robine;D. Roden;C. Roselli;I. Ruczinski;Alexi M. Runnels;Pamela H. Russell;S. Ruuska;Kathleen A. Ryan;E. Sabino;D. Saleheen;S. Salimi;Sejal Salvi;S. Salzberg;Kevin Sandow;V. Sankaran;J. Santibanez;K. Schwander;D. Schwartz;F. Sciurba;C. Seidman;J. Seidman;F. Sériès;V. Sheehan;S. Sherman;Amol Shetty;Aniket Shetty;W. Sheu;M. B. Shoemaker;Brian H. Silver;Edwin K. Silverman;Robert Skomro;A. Smith;Josh Smith;Nicholas L. Smith;Tanja Smith;S. Smoller;B. Snively;M. Snyder;T. Sofer;N. Sotoodehnia;A. Stilp;Garrett Storm;E. Streeten;J. Su;Y. Sung;Jody M Sylvia;A. Szpiro;D. Taliun;Hua Tang;M. Taub;M. Taylor;Simeon I. Taylor;M. Telen;Timothy A. Thornton;M. Threlkeld;Lesley E. Tinker;D. Tirschwell;Sarah A Tishkoff;H. Tiwari;Catherine Tong;R. Tracy;Michael Y. Tsai;Dhananjay Vaidya;David Van den Berg;Peter Vandehaar;S. Vrieze;Tarik Walker;R. Wallace;A. Walts;Fei Fei Wang;Heming Wang;Jiongming Wang;K. Watson;Jenn Watt;J. Weinstock;Bruce Weir;S. Weiss;L. Weng;J. Wessel;Kayleen Williams;L. Williams;Carla Wilson;L. Winterkorn;Q. Wong;Joseph Wu;Huichun Xu;Ivana V. Yang;Ketian Yu;S. Zekavat;Yingze Zhang;Snow Xueyan Zhao;Xiaofeng Zhu;E. Ziv;M. Zody;S. Zoellner;Elizabeth Christie Wei Romit Larry Joshua Corneliu Jennifer Atkinson Ballantyne Bao Bhattacharya Bielak Bis Bo;Elizabeth Atkinson;Chris Ballantyne;Wei Bao;Romit Bhattacharya;L. Bielak;J. Bis;C. Bodea;Jennifer A. Brody;B. Cade;Sarah Calvo;Jenna C Carlson;I. Chang;So Mi Cho;P. D. de Vries;Ana F. Diallo;Ron Do;Jacqueline S Dron;A. Elliott;H. Finucane;Caitlin Floyd;A. Ganna;Dawei Gong;Sarah E. Graham;M. Haas;Bernhard Haring;Scott Heemann;Blanca E. Himes;G. Jarvik;Jicai Jiang;R. Joehanes;Paule Valery Joseph;G. Jun;Rita R. Kalyani;M. Kanai;S. Kathiresan;Amit Khera;Sumeet A. Khetarpal;D. Klarin;S. Koyama;B. Kral;Leslie A. Lange;R. Lemaitre;Changwei Li;Yingchang Lu;Lisa W. Martin;R. Mathias;Ravi Mathur;S. McGarvey;John C. McLenithan;Amy Miller;V. Mootha;Andrew Moran;T. Nakao;Jeffrey R. O’Connell;Christopher J. O’Donnell;Nicholette D. Palmer;K. Paruchuri;Aniruddh P Patel;G. Peloso;M. Pettinger;P. Peyser;J. Pirruccello;B. Psaty;Alexander P. Reiner;S. Rich;Samantha Rosenthal;Jerome I. Rotter;Jennifer A. Smith;S. Sunyaev;I. Surakka;Carole Sztalryd;M. Trinder;M. Uddin;S. Urbut;Eric Van Buren;M. Verbanck;A. Von Holle;Yuxuan Wang;Kerri Wiggins;John T. Wilkins;Cristen J. Willer;James G. Wilson;Brooke Wolford;L. Yanek;Zhi Yu;N. Zaghloul;Jingwen Zhang;Ying Zhou;Jerome I. Rotter;Cristen J. Willer;P. Natarajan;G. Peloso;Xihong Lin - 通讯作者:
Xihong Lin
Lewis C Becker的其他文献
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{{ truncateString('Lewis C Becker', 18)}}的其他基金
Clonal Hematopoiesis in Healthy Individuals from Families with Early OnsetCoronary Artery Disease
早发冠状动脉疾病家族的健康个体的克隆性造血
- 批准号:
10393540 - 财政年份:2019
- 资助金额:
$ 85.14万 - 项目类别:
Clonal Hematopoiesis in Healthy Individuals from Families with Early OnsetCoronary Artery Disease
早发冠状动脉疾病家族的健康个体的克隆性造血
- 批准号:
9923751 - 财政年份:2019
- 资助金额:
$ 85.14万 - 项目类别:
Gene Transcripts and Proteomics in Families with Platelet Hyperaggregation
血小板过度聚集家族的基因转录和蛋白质组学
- 批准号:
9258474 - 财政年份:2014
- 资助金额:
$ 85.14万 - 项目类别:
Gene Transcripts and Proteomics in Families with Platelet Hyperaggregation
血小板过度聚集家族的基因转录和蛋白质组学
- 批准号:
9039140 - 财政年份:2014
- 资助金额:
$ 85.14万 - 项目类别:
Gene Transcripts and Proteomics in Families with Platelet Hyperaggregation
血小板过度聚集家族的基因转录和蛋白质组学
- 批准号:
8696113 - 财政年份:2014
- 资助金额:
$ 85.14万 - 项目类别:
Functional Genomics of Platelet Aggregation Using iPS and Derived Megakaryocytes
使用 iPS 和衍生巨核细胞进行血小板聚集的功能基因组学
- 批准号:
8690135 - 财政年份:2011
- 资助金额:
$ 85.14万 - 项目类别:
Functional Genomics of Platelet Aggregation Using iPS and Derived Megakaryocytes
使用 iPS 和衍生巨核细胞进行血小板聚集的功能基因组学
- 批准号:
8294698 - 财政年份:2011
- 资助金额:
$ 85.14万 - 项目类别:
Functional Genomics of Platelet Aggregation Using iPS and Derived Megakaryocytes
使用 iPS 和衍生巨核细胞进行血小板聚集的功能基因组学
- 批准号:
8501668 - 财政年份:2011
- 资助金额:
$ 85.14万 - 项目类别:
Functional Genomics of Platelet Aggregation Using iPS and Derived Megakaryocytes
使用 iPS 和衍生巨核细胞进行血小板聚集的功能基因组学
- 批准号:
8094912 - 财政年份:2011
- 资助金额:
$ 85.14万 - 项目类别:
Functional Genomics of Platelet Aggregation Using iPS and Derived Megakaryocytes
使用 iPS 和衍生巨核细胞进行血小板聚集的功能基因组学
- 批准号:
8868161 - 财政年份:2011
- 资助金额:
$ 85.14万 - 项目类别:
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