Mechanistic Studies of Cytoplasmic dsDNA-Sensing Pathways

细胞质 dsDNA 传感途径的机制研究

• 批准号: 10414309
• 负责人: JUNGSAN SOHN
• 金额: $ 5.82万
• 依托单位: JOHNS HOPKINS UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2018
• 资助国家: 美国
• 起止时间: 2018-09-20 至 2022-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/10414309
• 关键词: Agonist; Buffers; Cytoplasm; Equilibrium; Eukaryotic Cell; Future; Host Defense; Human; Immune response; Immunology; Inflammatory Response; Innate Immune Response; Innate Immune System; Kinetics; Length; Mammals; Mitochondria; Molecular; N Domain; Outcome; Pathway interactions; Play; RNA; Role; Shapes; Signal Transduction; Specificity; TREX1 gene; Testing; dimer; ds-DNA; novel therapeutic intervention; nuclease; pathogen; public health relevance; sensor

Project summary The presence of dsDNA in the cytoplasm signals serious problems in eukaryotic cells, ranging from dysfunctional mitochondria to pathogen invasion. In mammals, the innate immune system detects these rogue dsDNA and initiate inflammatory responses. Cytoplasmic dsDNA sensing pathways are integral to host defense against numerous pathogens, and their malfunctions are also implicated in various human maladies. Here, we will define the molecular mechanisms by which cytoplasmic dsDNA sensors initiate host innate immune responses in a coordinated fashion. In Aim 1, we will resolve several controversies regarding the activation mechanism of cGAS such as why dsDNA length matters (or not), what the role of N-domain is, and how cGAS dimerizes on dsDNA. In Aim 2, we will resolve a fundamental mechanistic question in innate immunology as to what defines the dsDNA specificity of cGAS, AIM2, and IFI16. We will then test whether cellular RNA can act as a buffer to minimize the spurious activation of these sensors. In Aim 3, we will determine whether differential kinetics of cGAS, AIM2, IFI16, and the TREX1 nuclease can shape the overall host response against cytoplasmic dsDNA. We will then investigate agonism and antagonism among these sensors in generating well-balanced host responses against cytoplasmic dsDNA.

项目摘要 dsDNA在细胞质中的存在信号在真核细胞中严重问题，范围 从功能失调的线粒体到病原体侵袭。在哺乳动物中，先天免疫系统 检测这些流氓dsDNA并启动炎症反应。细胞质dsDNA感应 途径对于托管众多病原体是不可或缺的，它们的故障是 也涉及各种人类疾病。 在这里，我们将定义细胞质DSDNA传感器启动的分子机制 以协调的方式主持先天免疫反应。在AIM 1中，我们将解决几个 关于CGA的激活机制的争议，例如为什么DSDNA长度很重要 （或不），n域的作用是什么，以及CGA如何在dsDNA上降低。在AIM 2中，我们将 解决先天免疫学中的基本机械问题，以定义什么 CGA，AIM2和IFI16的DSDNA特异性。然后，我们将测试细胞RNA是否可以充当 缓冲液以最大程度地减少这些传感器的伪激活。在AIM 3中，我们将确定 CGA，AIM2，IFI16和TREX1核酸酶的差异动力学是否可以塑造 总体宿主反应针对细胞质dsDNA。然后，我们将调查激动和 这些传感器之间的对抗在产生均衡的宿主反应中 细胞质dsDNA。

项目成果

Preparation of filamentous proteins for electron microscopy visualization and reconstruction.

用于电子显微镜可视化和重建的丝状蛋白的制备。

• DOI: 10.1016/bs.mie.2019.06.007
• 发表时间: 2019
• 期刊: Methods in enzymology
• 作者: Matyszewski,Mariusz;Sohn,Jungsan
• 通讯作者: Sohn,Jungsan

Characterization of DNA bound cyclic GMP-AMP synthase using atomic force microscopy imaging.

使用原子力显微镜成像表征 DNA 结合环 GMP-AMP 合酶。

• DOI: 10.1016/bs.mie.2019.07.031
• 发表时间: 2019
• 期刊: Methods in enzymology
• 作者: Lushnikov,Alexander;Hooy,Richard;Sohn,Jungsan;Krasnoslobodtsev,Alexey
• 通讯作者: Krasnoslobodtsev,Alexey

Cadenza ad libitum: cGAS and STING showcase their versatile virtuosities in the Ca2+-dependent rescue of stalled replication forks.

Cadenza ad libitum：cGAS 和 STING 展示了它们在 Ca2 依赖的停滞复制叉救援中的多才多艺。

• DOI: 10.1016/j.molcel.2023.01.021
• 发表时间: 2023
• 期刊: Molecular cell
• 影响因子: 16
• 作者: Sohn,Jungsan

The allosteric activation of cGAS underpins its dynamic signaling landscape.

• DOI: 10.7554/elife.39984
• 发表时间: 2018-10-08
• 期刊: eLife
• 影响因子: 7.7
• 作者: Hooy RM;Sohn J
• 通讯作者: Sohn J

A pyrophosphatase-coupled assay to monitor the NTase activity of cGAS.

• DOI: 10.1016/bs.mie.2019.06.005
• 发表时间: 2019
• 期刊: Methods in enzymology
• 作者: R. Hooy;J. Sohn