Functional analysis of non-proteolytic enzymes involved in carbon-nitrogen bond cleavage

参与碳氮键断裂的非蛋白水解酶的功能分析

基本信息

  • 批准号:
    14360047
  • 负责人:
  • 金额:
    $ 9.41万
  • 依托单位:
  • 依托单位国家:
    日本
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
  • 财政年份:
    2002
  • 资助国家:
    日本
  • 起止时间:
    2002 至 2004
  • 项目状态:
    已结题

项目摘要

Among non-proteolytic enzymes involved in carbon-nitrogen bond cleavage, two enzymes involved in isonitrile metabolism are described as follows.Isonitrile hydratase is a novel enzyme in Pseudomonas putida N19-2 that catalyzes the conversion of isonitriles to N-substituted formamides. Based on N-terminal and internal amino acid sequences, the isonitrile hydratase gene was cloned. The predicted amino acid sequence of inhA showed low similarity to that of an intracellular protease in Pyrococcus horikoshii (PH1704), and an active cysteine residue in the protease was conserved in the isonitrile hydratase at the corresponding position (Cys101). A mutant enzyme containing Ala instead of Cys101 did not exhibit isonitrile hydratase activity at all, demonstrating the essential role of this residue in the catalytic function.N-Substituted formamide was produced through the hydration of an isonitrile by isonitrile hydratase in the isonitrile metabolism. The former compound was further degraded by a … More microorganism, F164, which was isolated from soil through an acclimatization culture. The N-substituted formamide-degrading microorganism was identified as Arthrobacter pascens. The microbial degradation was found to proceed through an enzymatic reaction, the N-substituted formamide being hydrolyzed to yield the corresponding amine and formate. The enzyme, designated as N-substituted formamide deformylase (NfdA), was purified and characterized. It stoichiometrically catalyzed the hydrolysis of N-benzylformamide (NBFA : an N-substituted formamide) to benzylamine and formate. Of all the N-substituted formamides tested, NBFA was the most suitable substrate for the enzyme. However, no amides were accepted as substrates. The gene (nfdA) encoding this enzyme was also cloned. The deduced amino acid sequence of nfdA exhibited the highest overall sequence identity (28%) with those of regulatory proteins among known proteins. Only the N-terminal region of NfdA also showed significant sequence identity (27-73%) to that of each member of the amidohydrolase superfamily, although there was no similarity in the overall sequence except in the above limited region. Less
在碳氮键裂解的非蛋白质酶中,腹膜上水合物是一种新的酶,在pseudomonas putida n19-2中,它催化了异构体的转化为n-盐酸的正式和内部氨基酸序列。 . o that of an intracellular Protease in Pyrococcus Horikoshii (PH1704), and An Active Cysteine ​​Residue in The Protease Was Consusvered in THE ISONITRILE HYDRATASE AT TORRESPONDING POSITION (CYS101). Ivity at all, the essential role of this. Of An IsonitRile在异构体的代谢中,以前的综合酶是由溶解的,从土壤中溶解的。将N-取代的甲酰胺水解为相应的酶,被指定为N-取代的甲酰胺变形酶(NFDA),并表征了N-Benzylfa(NBFA):NBFA:NBFA。但是,作为底物的甲酸盐。 (27-73%)降低了酰胺水解酶超家族的每个成员,尽管整体序列中没有相似性,但区域较少

项目成果

期刊论文数量(64)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Higashibata, H. et al.: "Helicase and muclease activities of hyperthermophile pyrococcus horikoshii Dna2 inhibited by substrates with RNA segments at 5'-end"J.Biol.Chem.. 278. 15983-15990 (2003)
Higashibata, H. 等人:“5 端带有 RNA 片段的底物抑制超嗜热菌热球菌 Dna2 的解旋酶和核酸酶活性”J.Biol.Chem.. 278. 15983-15990 (2003)
  • DOI:
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  • 影响因子:
    0
  • 作者:
  • 通讯作者:
Shiraki, K. et al.: "Genetic, enzymatic and structural analyses of phenylalanyl-tRNA Synthetase from Thermococcus Kodakaraensis KOD1"J.Biochem.. 134. 567-574 (2003)
Shiraki, K. 等人:“来自Thermococcus Kodakaraensis KOD1 的苯丙氨酰-tRNA 合成酶的遗传、酶学和结构分析”J.Biochem.. 134. 567-574 (2003)
  • DOI:
  • 发表时间:
  • 期刊:
  • 影响因子:
    0
  • 作者:
  • 通讯作者:
Stopped-flow Spectrophotometric and Resonance Raman Analyses of Aldoxine Dehydrafase Involved in Carbon-Nitrogen Triple Bond Synthesis.
碳氮三键合成中涉及的醛醇脱水酶的停流分光光度和共振拉曼分析。
  • DOI:
  • 发表时间:
    2005
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Oinuma;K-I. et al.
  • 通讯作者:
    K-I. et al.
Identification of crucial histidines involved in carbon-nitrogen triple bond synthesis by aldoxime dehydratase
  • DOI:
    10.1074/jbc.m407223200
  • 发表时间:
    2004-11-12
  • 期刊:
  • 影响因子:
    4.8
  • 作者:
    Konishi, K;Ishida, K;Kobayashi, M
  • 通讯作者:
    Kobayashi, M
Goda, M.et al.: "Isonitrile hydrotase from Psundomonas putida N19-2"J.Biol.Chem.. 277. 45860-45865 (2002)
Goda,M.等人:“来自恶臭假单胞菌 N19-2 的异腈水解酶”J.Biol.Chem.. 277. 45860-45865 (2002)
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  • 影响因子:
    0
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KOBAYASHI Michihiko其他文献

KOBAYASHI Michihiko的其他文献

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{{ truncateString('KOBAYASHI Michihiko', 18)}}的其他基金

Studies on unique inducible protein expression system for streptomycetes
链霉菌独特诱导蛋白表达系统的研究
  • 批准号:
    16K14878
  • 财政年份:
    2016
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Challenging Exploratory Research
Microbial degradation of bioactive substance from turmeric
姜黄中生物活性物质的微生物降解
  • 批准号:
    26660055
  • 财政年份:
    2014
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Challenging Exploratory Research
Interdisciplinary analysis of Japan's experience of the First World War: using new primary resources
日本第一次世界大战经历的跨学科分析:利用新的主要资源
  • 批准号:
    24330052
  • 财政年份:
    2012
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Characterization of an N3 compound-degrading enzyme
N3 化合物降解酶的表征
  • 批准号:
    24658070
  • 财政年份:
    2012
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Challenging Exploratory Research
Comprehensive elucidation and application of the function of enzymes involved in cleavage and synthesis of a carbon-nitrogen bond
碳氮键断裂与合成酶功能的全面阐明与应用
  • 批准号:
    23228002
  • 财政年份:
    2011
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (S)
Analyses of the N-substituted formamide metabolic pathway and their applications to the production of useful compounds
N-取代甲酰胺代谢途径的分析及其在有用化合物生产中的应用
  • 批准号:
    19208008
  • 财政年份:
    2007
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (A)
Development of Rhodococcus promoter for utilization in actinomycetes
开发用于放线菌的红球菌启动子
  • 批准号:
    13556011
  • 财政年份:
    2001
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Studies on enzymes and genes involved in biosynthesis of plant hormone, auxin
植物激素、生长素生物合成相关酶和基因的研究
  • 批准号:
    08456173
  • 财政年份:
    1996
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Development of novel expression vectors utilizing gene promoters involved in nitrile metabolism
利用参与腈代谢的基因启动子开发新型表达载体
  • 批准号:
    07556073
  • 财政年份:
    1995
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (A)
Molecular functional analysis of gene cluster involved in nitrile metabolism
腈代谢相关基因簇的分子功能分析
  • 批准号:
    06660101
  • 财政年份:
    1994
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (C)

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低营养诱导粘着箭菌啶虫脒腈水合酶基因pnhA表达的转录调控机制研究
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    31970094
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相似海外基金

Structural determination of the reaction intermediate of nitrile hydratase by XFEL and neutron beam
XFEL和中子束测定腈水合酶反应中间体的结构
  • 批准号:
    19H02667
  • 财政年份:
    2019
  • 资助金额:
    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Uncovering the catalytic mechanism of nitrile hydratase based on the structure of the novel cyclic reaction intermediate
基于新型循环反应中间体的结构揭示腈水合酶的催化机制
  • 批准号:
    15H03832
  • 财政年份:
    2015
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    $ 9.41万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Elucidation of catalytic mechanisms as well as subunit-assembly of nitrile hydratase family enzymes by using advanced structural studies
通过先进的结构研究阐明腈水合酶家族酶的催化机制和亚基组装
  • 批准号:
    24350082
  • 财政年份:
    2012
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    $ 9.41万
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STRUCTURE-FUNCTION RELATIONSHIPS IN FE- AND CO-CONTAINING NITRILE HYDRATASES
含铁和共基腈水合酶的结构-功能关系
  • 批准号:
    8362239
  • 财政年份:
    2011
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    $ 9.41万
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INVESTIGATION OF ELECTRONIC STRUCTURES OF FE-S AND MO-S ACTIVE SITES AND THEIR R
FE-S和Mo-S活性位点的电子结构及其R的研究
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    8362082
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