Core: Infrastructure

核心：基础设施

• 批准号: 8935564
• 负责人: Elizabeth Jurrus
• 金额: $ 4.16万
• 依托单位: UNIVERSITY OF UTAH
• 依托单位国家: 美国
• 资助国家: 美国
• 起止时间: 至
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/8935564
• 关键词: Address; Adopted; Algorithms; Architecture; Area; Automobile Driving; Biomedical Computing; Biomedical Research; Brain; Brain imaging; Categories; Cloud Computing; Code; Collaborations; Communities; Computer software; Data; Data Analyses; Engineering; Ensure; Feedback; Foundations; Goals; Image; Imagery; Imaging Device; Investments; Libraries; Location; Maintenance; Memory; Modeling; Online Systems; Population Analysis; Process; Reading; Research Infrastructure; Resources; Services; Software Engineering; Source Code; System; Technology; Testing; Translations; abstracting; base; cloud based; community planning; data management; data sharing; design; heart imaging; image registration; improved; novel; open source; programs; simulation; tool; usability

5.1 Summary/Abstract In previous years, we have focused our infrastructure on stabilizing our software code base, improving the us- ability, and adding provenance support. This effort has had a tremendous impact on extending our software for use in other application areas. With feedback from our Driving Biomedical Projects and collaborators, we have identified three main areas we plan to target to improve our infrastructure. First, as our users make more use of our image-based modeling pipeline, we realize that users will benefit from complete compatibility of data across our tools as well as creating a common interface that enables simplified user navigation. Second, as our col- laboration base grows, we seek to incorporate novel state-of-the-art processing tools and frameworks. We will build on recent progress in maturity of open source tools that provide access to a broader range of resources, such as data sharing, cloud computing, and image registration algorithms. Finally, maintaining numerous shared open source libraries requires a strong infrastructure and foundation for a stable code base, issue tracking, and opening our source code to a broader community. To address these needs, the CIBC Infrastructure component will focus on three major categories: (1) Trans- lational Software: tight integration of technology developed at the Center across software products, (2) Applica- tion Framework: incorporation of commonly requested tools for image filtering and registration into our software applications along with adopting a microservice architecture for remote deployment, and (3) Core Functionality: maintenance of our software support and code management infrastructure to develop additional core software and engage in community support. By addressing the needs in each of these three categories, we expect to expand our impact to the Biomedical Research Clusters defined in this renewal.

5.1摘要/摘要 在过去的几年中，我们将基础架构集中在稳定我们的软件代码库上，改善了美国。 能力，并增加出处支持。这项工作对扩展我们的软件的影响有很大的影响 在其他应用领域使用。在我们驾驶生物医学项目和合作者的反馈中，我们有 我们计划针对改善基础设施的三个主要领域。首先，随着我们的用户更多地使用 我们基于图像的建模管道，我们意识到用户将从跨数据的完全兼容性中受益 我们的工具以及创建一个可以简化用户导航的通用接口。第二，作为我们的col- 劳动基地的增长，我们试图纳入新颖的最新处理工具和框架。我们将 基于开源工具的最新成熟进展，这些工具可访问更广泛的资源， 例如数据共享，云计算和图像注册算法。最后，维持许多共享 开源库需要强大的基础架构和稳定代码基础的基础，问题跟踪和 向更广泛的社区开放我们的源代码。 为了满足这些需求，CIBC基础架构组件将集中在三个主要类别上：（1）Trans- 元素软件：跨软件产品在中心开发的技术的紧密集成，（2）应用程序 - 框架：将通常要求的工具纳入图像过滤和注册到我们的软件中 应用程序以及采用用于远程部署的微服务体系结构，以及（3）核心功能： 维护我们的软件支持和代码管理基础架构以开发其他核心软件 并参与社区支持。通过满足这三个类别中的每一个的需求，我们希望 将我们的影响扩大到该续签中定义的生物医学研究群集。